Gene TM1040_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1075 
Symbol 
ID4077215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1150977 
End bp1151783 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID638006379 
Productserine O-acetyltransferase 
Protein accessionYP_613070 
Protein GI99080916 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.128961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.266811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATA CACATAAGGC CGTGAGGCAA ATCGACCCTG TCTGGGGCCG GATCACCGAA 
GAAGCGGAAA GAGCCGTCGC AGAACAACCC TTGATGGGTG GGCTGATTCA TGCCTGCATT
CTCCACCACA AGACGCTCGA CAAGGCGCTG AGTTACCGGA TTGCGGCCAA GCTCTGTTCC
AACGAGATGT CGATGGTGAT CCTGCGCGAG ATCGTTGATG GCGCTTATGA GGCCGAGCCC
GCGCTGGTTG AGGCCGCGCG CGCCGACCTG ATGGCCGTCT TTGAGCGCGA CCCTGCCTGC
CACCGGCTCT TGCAGCCGAT CCTCTACTTC AAAGGCTATC AGGCCATTCA GGCCTACCGC
GTGGGCCATT GGCTCTGGCA GCAGGGCGAT TGGGACCTGG CCTATTTCTT CCAGATGCGG
ATCTCCGAGA TCTTTGGCGT CGATATCCAT CCGGCGGCGA AGATCGGCAA GGGGATCATG
ATCGACCACG CCCATTCCAT CGTGATCGGG GAAACCGCCG TGGTGGGGGA CAATGTGTCG
ATGCTGCATT CGGTGACGCT GGGCGGGACC GGCAAGGAAG AAGAGGACCG TCACCCCAAG
ATCGAGGATG GCGTGCTGAT CGGTGCGGGC GCCAAGGTGC TGGGCAATAT CCGCATCGGT
CACTGCTCGC GCATTGCGGC GGGGTCCGTG GTGCTGCAGG AGGTGCCGCC CTGCAAGACC
GTGGCCGGGG TGCCCGCAAA GATCGTGGGC GAGGCGGGCT GCGATCAGCC CTCCGTCAGC
ATGAACCAGG TGCTTGCGGG GAAATAG
 
Protein sequence
MLDTHKAVRQ IDPVWGRITE EAERAVAEQP LMGGLIHACI LHHKTLDKAL SYRIAAKLCS 
NEMSMVILRE IVDGAYEAEP ALVEAARADL MAVFERDPAC HRLLQPILYF KGYQAIQAYR
VGHWLWQQGD WDLAYFFQMR ISEIFGVDIH PAAKIGKGIM IDHAHSIVIG ETAVVGDNVS
MLHSVTLGGT GKEEEDRHPK IEDGVLIGAG AKVLGNIRIG HCSRIAAGSV VLQEVPPCKT
VAGVPAKIVG EAGCDQPSVS MNQVLAGK