| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1074 |
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| Symbol | |
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| ID | 4077214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1150412 |
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| End bp | 1150618 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006378 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_613069 |
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| Protein GI | 99080915 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0836241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.241517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAATG GTACCGTGAA GTGGTTTAAC TCCACCAAAG GTTACGGCTT CATCGCGGTT
GAAGGCCGCT CCAACGACGT GTTCGTGCAC ATCTCCGCAG TGGAACGCTC CGGTCTGACC
GGTCTGGCCG ACGGCCAGGC AGTGACCTTC GAGATCCAGT CCGGTCGTGA CGGCCGCGAA
TCCGCAACCG ATCTGGCTCT GGCCTAA
|
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| Protein sequence | MANGTVKWFN STKGYGFIAV EGRSNDVFVH ISAVERSGLT GLADGQAVTF EIQSGRDGRE
SATDLALA
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