| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1060 |
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| Symbol | |
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| ID | 4077200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1139140 |
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| End bp | 1139712 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638006364 |
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| Product | peptidase U35, phage prohead HK97 |
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| Protein accession | YP_613055 |
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| Protein GI | 99080901 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3740] Phage head maturation protease |
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| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0756377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACAG AGCATGCCCC CGAGCTTGAG ACCAAATTCG CCCGTTTTGG TGAGGCGCTG
ACCCTGACTG AGGGCGAGGT GATCGAAGGC TACGCAAGCC TCTTTGGCGT GGCCGATCAA
GGCAAGGATA TCGTCACGCG TGGCGCTTAT GCGGCCTCGC TGGCGGCGCA TCAGGCGCGC
GGCAGCAAGG TCAAGATGCT CTGGCAGCAT GACCCGAGCC ACCCCATCGG TGTCTGGGAC
GAAATCCTTG AGGACGAGAC CGGCCTGCGC GTCAAAGGCC GTATCCTGAC AGAAACCCAG
AAAGGCGCCG AGGCCGCCGC CCTGGTGCGC GCGGGCGCCA TCGAGGGGCT GTCGATCGGC
TATCGCACCC TCAAGGCCAC CCGCGACAAG GAAGGCCATC GCCGGCTTGA GGACCTCGCC
CTCTGGGAGG TGTCTCTGGT GACGTTTCCG ATGCTGCCCT CCGCGCGGGT GTCCCGCACG
GCCCGCCGCG CGGCAGAGGC CGCGAAATCC GACGCCCCCG AGGCGGGGCT GCGCGCGCTT
GCCGAAGCGC TGCGGGCCGC CACCAATCCC TAA
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| Protein sequence | MLTEHAPELE TKFARFGEAL TLTEGEVIEG YASLFGVADQ GKDIVTRGAY AASLAAHQAR
GSKVKMLWQH DPSHPIGVWD EILEDETGLR VKGRILTETQ KGAEAAALVR AGAIEGLSIG
YRTLKATRDK EGHRRLEDLA LWEVSLVTFP MLPSARVSRT ARRAAEAAKS DAPEAGLRAL
AEALRAATNP
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