| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1054 |
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| Symbol | |
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| ID | 4078112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1133065 |
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| End bp | 1134333 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006358 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
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| Protein accession | YP_613049 |
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| Protein GI | 99080895 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0590595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGAG TAGTAGTTAC CGGTCTGGGC CTGGTGACCC CCCTGGCATC TGGGGTTGAG
GAAACTTGGG CACGTCTTCT GGATGGCCAG TCCGGCGCGG GCCCCATCAC TCTGTTTGAT
GCAGAGGCCA GCGGTGTTGC AACAACCTAT GCCTGTGAAG TGCCCCGTGG CGACGGCAGC
AATGGCACCT TCAATCCTGA CGATTGGGTT GTGAAAAAAG ATCAAAAGAA GATCGACGAT
TTCATCCTCT ACGGGATCGC CGCCGCTGAA ATGGCCGTGA AGGACGCAGG CTGGACCCCC
GAAGCCGAAG AGGACCGTCT GCGCACCGGC GTGATGATCG GCTCCGGTAT CGGTGGTCTG
AGCTCGATTG CAGATACAGC CGTCATGATT AAGGAAAAGG GCCCGCGTCG CGTGTCTCCG
TTCTTTATTC CCGGCGCGCT GATCAACCTC ATCTCCGGTC AGGTCTCCAT CCGTCATGGC
TTCAAAGGTC CAAACCACTC GGTTGTGACC GCGTGTTCCA CGGGCGCTCA TGCGATTGGC
GATGCGTCGC GTCTCATTAA ATCCGGCGAT GCGGATGTGA TGATCGCGGG CGGGGCCGAG
GCGGCAATCT GCGAGATCGG CATTGCGGGA TTTAACGCGT GCAAGGCGCT TTCGACGAAA
TATGCCGAGG ATCCCACCAA AGCCTCGCGT CCCTATGATG CGGACCGTGA CGGCTTCGTG
ATGGGCGAGG GCGCGGGCAT CGTGGTGCTC GAGGAATACG AACACGCCAA GGCGCGCGGC
GCCAAGATCT ACGGCGAGGT TCTGGGCTAT GGTCTGTCGG GCGATGCCTA TCACATCACC
GCCCCCTCCG AGGATGGCGA AGGCGGCGAA CGCTCCATGC GCGCTGCACT GGCCAATGCG
GGGCTGAGCG CGGCAGATGT CGACTATATC AACGCGCATG GCACCTCCAC CATGGCCGAC
ACCATCGAGC TTGGTGCCGT GGAGCGTCTG TTGGGCGATC ACGCCAAGAA TGCGACGATG
TCCTCGACCA AATCCGCAAC CGGGCACCTT TTGGGCGCGG CGGGTGCGAT CGAGGCGATC
TTCTCCATTC TGGCGATCCG CGATCAGGTG GCCCCGCCCA CCATCAACCT CGACACCCCT
GCCGTGGAAA CGCCGGTTGA TCTGGCCCCC AATGCCAAGC GCGAACGCAA GATCGACGTG
GCGCTGTCCA ACTCCTTCGG CTTTGGCGGC ACCAATGCTT CGGTGGTCTT CGGGAAAGTG
AGCGACTGA
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| Protein sequence | MRRVVVTGLG LVTPLASGVE ETWARLLDGQ SGAGPITLFD AEASGVATTY ACEVPRGDGS
NGTFNPDDWV VKKDQKKIDD FILYGIAAAE MAVKDAGWTP EAEEDRLRTG VMIGSGIGGL
SSIADTAVMI KEKGPRRVSP FFIPGALINL ISGQVSIRHG FKGPNHSVVT ACSTGAHAIG
DASRLIKSGD ADVMIAGGAE AAICEIGIAG FNACKALSTK YAEDPTKASR PYDADRDGFV
MGEGAGIVVL EEYEHAKARG AKIYGEVLGY GLSGDAYHIT APSEDGEGGE RSMRAALANA
GLSAADVDYI NAHGTSTMAD TIELGAVERL LGDHAKNATM SSTKSATGHL LGAAGAIEAI
FSILAIRDQV APPTINLDTP AVETPVDLAP NAKRERKIDV ALSNSFGFGG TNASVVFGKV
SD
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