| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1051 |
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| Symbol | |
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| ID | 4078109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1130221 |
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| End bp | 1130958 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006355 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
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| Protein accession | YP_613046 |
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| Protein GI | 99080892 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.305162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0955164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATC TGACAGGTAA GAACGCGCTG ATCACAGGCG CATCCGGTGG CATCGGTGGC
GACATTGCGC GCGCGCTCCA CGCAGCGGGG GCGACTGTTG CGCTCTCCGG CACCCGGCCA
GACCCGCTGC ACGCCTTGGC CGAGGAGCTT GGCGAGCGGG CTCATGTTGT GACCTGCAAC
CTCTCCGACG CCGAGGCCGT CGAGGCGCTG CCGAAACAGG CCGCAGAGGC GATGGGCTCT
GTTGACATCC TGGTCAACAA CGCCGGGATC ACCAAGGACA ACCTCTTTAT GCGGATGAAG
GATGAAGAGT GGCAGAGCGT TCTCGATGTG AACCTCACCT CCACCATGCG CCTGTGCCGC
GGTGTGCTGC GCGGCATGAT GAAGGCACGC TGGGGCCGGA TCGTGAATAT CTCCTCCGTT
GTGGGCGCCA CCGGCAACCC CGGTCAGGGC AACTATGCGG CCTCCAAGGC GGGCATGGTC
GGCATGTCCA AGTCGCTGGC CTATGAGGTT GCAAACCGTG GCATCACCGT GAACGCCGTG
GCGCCGGGCT TCATCGCGAC CGCCATGACC GACAAACTCA ACGACACCCA GAAAGAGGCG
ATCCTCAGCC AGATCCCCGC AGGCCGTATG GGGGATTCGA AAGAAATCGC CGCCGCAGTG
CTTTATCTGG CGTCGCAAGA AGCCGCCTAT GTCACCGGCA CCACGCTGCA TGTGAATGGC
GGCATGGCGA TGCTCTAA
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| Protein sequence | MFDLTGKNAL ITGASGGIGG DIARALHAAG ATVALSGTRP DPLHALAEEL GERAHVVTCN
LSDAEAVEAL PKQAAEAMGS VDILVNNAGI TKDNLFMRMK DEEWQSVLDV NLTSTMRLCR
GVLRGMMKAR WGRIVNISSV VGATGNPGQG NYAASKAGMV GMSKSLAYEV ANRGITVNAV
APGFIATAMT DKLNDTQKEA ILSQIPAGRM GDSKEIAAAV LYLASQEAAY VTGTTLHVNG
GMAML
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