| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1050 |
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| Symbol | |
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| ID | 4078108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1129265 |
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| End bp | 1130200 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638006354 |
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| Product | [Acyl-carrier-protein] S-malonyltransferase |
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| Protein accession | YP_613045 |
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| Protein GI | 99080891 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0651965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0987344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCG CTTTTGTTTT CCCCGGCCAG GGGGCTCAGA CCATCGGAAT GGGCAAAGCG
CTGGCGGAGG CTTATCCGGC CGCCAAAGCC GTGTTCAACG AGGTGGACGA GGCCCTCGGA
GAGAGCCTGA GCCACCTGAT CTGGGAGGGC GACATCGAGA CCTTGACCCT GACGCAGAAC
GCTCAGCCGG CGTTGATGGC GACCTCCATG GCGGCAATGC GCGCGCTGGA GGCAGAGGGC
GTCAGCATCG ACAAGGCCGC CTTTGTGGCC GGGCACTCCT TGGGGGAATA TTCCGCGCTG
GCGGCAGCCG GTGCGCTCTC GATCGCCGAC ACCGCTCGCC TGCTGCGCAC TCGAGGGCAG
GCGATGCAAA GCGCCGTGCC GGTGGGTGTC GGTGCGATGG CCGCGCTTCT CGGGCTTGAT
TTTGAAACCG TAAAAGCCGT GGCCGCCGAG GCCGCAGCCG AGGGCGAGGT GGTGCAGGCC
GCAAATGACA ATGACCCGAC GCAGGTGGTG GTCTCCGGCC ACAAGGCCGC GGTAGAGCGC
GCCGCCGAGA TCGCCAAGGA AAAAGGCGCC AAACGCGCGG TGATGCTGCC GGTCTCCGCC
CCCTTCCACT GTGCCCTGAT GCAGCCCGCC GCCGATGTGA TGGCCGAGGC ACTTGCAGGC
GTGGAAATCA AGGCGCCTGC GGTGCCGCTG ATCGCCAATG TGCGCGCCGA TGCGGTCACC
GACCCCGACA CCATCCGCGC CCTTTTGGTG GAGCAGGTCA CAGGGTCGGT GCGCTGGCGC
GAGAGCGTCG CGGCGATGGC GGCCAAGGGC GTCACAGAGT TCTGGGAGAT CGGCGCGGGC
AAGGCGCTTT CGGGTATGAT CCGCAAGATC GACCGTTCCC TGGTCTCAAA ACAGGTCGGC
ACCGACGCTG ACGTCAAAGC CGTGACCGGC GCATAA
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| Protein sequence | MSIAFVFPGQ GAQTIGMGKA LAEAYPAAKA VFNEVDEALG ESLSHLIWEG DIETLTLTQN
AQPALMATSM AAMRALEAEG VSIDKAAFVA GHSLGEYSAL AAAGALSIAD TARLLRTRGQ
AMQSAVPVGV GAMAALLGLD FETVKAVAAE AAAEGEVVQA ANDNDPTQVV VSGHKAAVER
AAEIAKEKGA KRAVMLPVSA PFHCALMQPA ADVMAEALAG VEIKAPAVPL IANVRADAVT
DPDTIRALLV EQVTGSVRWR ESVAAMAAKG VTEFWEIGAG KALSGMIRKI DRSLVSKQVG
TDADVKAVTG A
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