| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1044 |
|---|
| Symbol | rpsR |
|---|
| ID | 4078102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1124232 |
|---|
| End bp | 1124459 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638006348 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_613039 |
|---|
| Protein GI | 99080885 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.143453 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCA AACCATTTTT CCGTCGCCGG AAAGTGTGCC CGTTCTCTGG TGAGAACGCA
CCCAAAATCG ACTACAAAGA CACGCGTCTC CTGCAGCGCT ACATCTCTGA GCGTGGCAAG
ATCGTGCCGT CCCGTATCAC CGCCGTTTCG GCAAAGAAGC AGCGTGAACT GGCCCGTGCC
ATCAAACGCG CCCGCTTCCT CGCCCTGCTG CCCTATGCCG TGAAGTAA
|
|---|
| Protein sequence | MAAKPFFRRR KVCPFSGENA PKIDYKDTRL LQRYISERGK IVPSRITAVS AKKQRELARA
IKRARFLALL PYAVK
|
|---|
| |