| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1043 |
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| Symbol | rplI |
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| ID | 4078101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1123604 |
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| End bp | 1124218 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006347 |
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| Product | 50S ribosomal protein L9 |
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| Protein accession | YP_613038 |
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| Protein GI | 99080884 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0359] Ribosomal protein L9 |
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| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0955164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGTTA TCCTTCTTGA ACGTGTTGCA AAGCTCGGCC AGATGGGCGA CGTCGTTGAC
GTAAAGCCCG GTTTCGCACG CAACTACCTG CTGCCGCAGG GCAAGGCTCA GACCGCGTCT
GACGCCAACA TCGCAGCTTT TGAAGCCCAG AAAGCGCAGC TCGAAGCGCG CAACCTGGAG
ACCAAAAAAG AAGCAGAAGC TCTAGGCGAG AAACTCGGCG GCCAGCAGTT CGTCGTGATT
CGCTCTGCCT CCGATGGCGG CAACCTCTAC GGCTCCGTCA CCACCCGTGA CGCGGCTGAC
GTTGCAACCG AAGAAGGCTT CTCGGTGGAC CGCAAGCAGG TCATCATCCG TGAGCCGATC
AAAACCCTGG GTCTGCACAT CGCAGAAGTG CACCTGCACC CCGAGGTTAT GGTGACCATC
GAGCTGAACG TGGCCCGCTC CCCCGAGGAA GCGGAACTTC AGGCCTCCGG CAAGTCCATC
CAGGAACTGG CCGCTGAAGA AGAAGCCGCA GCAGAGTTCG AAATCTCCGA ACTCTTCGAC
GACATCGGTG GCGCAGCTTC CGACGACGAA GGCGACGCTC CGGCAGCCGC CGCAGACGAA
GAAGAGTCCA AGTAA
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| Protein sequence | MQVILLERVA KLGQMGDVVD VKPGFARNYL LPQGKAQTAS DANIAAFEAQ KAQLEARNLE
TKKEAEALGE KLGGQQFVVI RSASDGGNLY GSVTTRDAAD VATEEGFSVD RKQVIIREPI
KTLGLHIAEV HLHPEVMVTI ELNVARSPEE AELQASGKSI QELAAEEEAA AEFEISELFD
DIGGAASDDE GDAPAAAADE EESK
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