| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1026 |
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| Symbol | |
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| ID | 4078538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1097776 |
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| End bp | 1100565 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006330 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_613021 |
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| Protein GI | 99080867 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.851197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGT ACACAGACTA CCTAAATGAG ATCGAAACCC GCAAAGGCGA GGGGCTGCAC
CCCAAGCCCA TCGACGATGG CGCGCTGGTT GCGGAATTGA TTGCGCAGAT CAAGGACACC
GGGAGCGAGC ATCGTGAAGA CTCTCTGAAG TTCTTCATTT ACAACACCTT GCCCGGCACC
ACGAGCGCTG CAGGTGTCAA GGCGGCGTTT CTCAAAGAGA TCATTCTGGG CGAGGCCGAG
GTGGCTGAAA TCACGCCCGA GTTCGCCTTT GAACTGCTGT CGCACATGAA GGGTGGTCCC
TCGGTCGAGG TGCTTCTGGA TCTGGCCCTC GGTGAGGATG CAGGGATCGC CCAGCAGGCC
GCAGACGTGC TGAAGACACA GGTGTTCCTC TATGAGGCGG ACACCGATCG TCTCGAAGCA
GCTTACAAGG CTGGCAATGC GATTGCGCGT GAGATCCTCG AGAGCTACGC CAAGGCCGAG
TTCTTTACCA AGCTTCCCGA TGTGGATGAT GAGATCAAGG TCGTGACCTA CATCGCCGCC
GAAGGCGATA TCTCCACCGA CCTTCTGTCC CCGGGCAATC AGGCGCACTC GCGTTCGGAT
CGGGAACTGC ATGGCAAATG CATGATCTCC GAGGCGGCGC AAAAGGAGAT CGAGGCGCTG
AAGCTGCAGC ACCCCGACAA GCGCGTGATG CTGATCGCGG AAAAAGGCAC CATGGGCGTG
GGCTCCTCGC GGATGTCCGG CGTCAACAAC GTGGCGCTCT GGACCGGCAA ACAAGCCAGC
CCCTATGTGC CGTTTGTGAA CTATGCCCCT GTGGTTGCGG GCACCAATGG CATCTCGCCG
ATTTTCCTCA CCACCGTGGG CGTGACCGGC GGCATTGGCC TCGACCTCAA GAACTGGGTC
AAGAAGGTCG ATAGCGACGG CAAGGCGATC CTCAACAACG ACGGCAACCC GGTGCTGGAG
CAGAAGTATT CTGTTGAAAC CGGCACGGTG CTGAAGATCG ACACCAAGAA CAAGAAGCTC
CTGAGCGAAG ACGGCGAGGA GCTGGTGGAT GTCTCGTCCG CGTTTACGCC CCAGAAGGTC
GAGTTCATGA AGGCGGGCAG CTCTTATGCC ATCGTCTTTG GCAAGAAACT GCAGACATTT
GCGGCCGAGA CCCTCGGCAT CGAGGCGCCG CTGGTCTTTG CACCGGCGAA AGAAGTCAGC
CACGAGGGCC AGGGCCTGAC TGCGGTTGAA AAGATCTTTA ACCGCAATGC CGTGGGCAGC
ACGCCGGGCA AGACGCTCCA TGCGGGCTCT GACGTGCGCG TGAAGGTCAA CATTGTCGGC
TCTCAGGACA CCACTGGTCT CATGACCTCG CAAGAACTGG AGGCCATGGC GGCCACCGTG
ATCTCGCCGA CCGTGGATGG GGCCTATCAG TCCGGCTGTC ACACCGCGTC CGTGTGGGAC
AAGAAGGCAC AGGCCAACAT TCCGCGTCTG ATGAAGTTCA TGAACAACTT CGGCCTGATC
ACCGCGCGCG ATCCAAAGGA TCAGTATCAC GCGATGACCG ACGTGATCCA TAAGGTGCTG
AACGACCTCA CCGTGGATGA CTGGGACATC ATCATCGGCG GCGACAGCCA CACCCGCATG
TCCAAAGGCG TGGCCTTTGG TGCGGACTCG GGTACCGTGG CGCTGGCGCT GGCAACCGGT
GAGGCGACCA TGCCAATCCC CGAGTCGGTC AAAGTGACCT TCAAGGGCAA GATGGCCGAC
CATATGGACT TCCGCGATGT GGTTCACGCC ACCCAGGCGC AGATGCTCAA GCAGCATGGC
GACAACGTCT TCCAGGGCCG CGTCATCGAG GTCCACATCG GCACGCTCCT GGCAGACCAG
GCCTTTACCT TCACCGACTG GACGGCCGAG ATGAAGGCCA AGGCGTCGAT CTGTATCTCC
AATGACGATA CGCTCATCGG CTCGCTCGAG CTCGCCAAGA GCCGCATCCA GATCATGATC
GACAAAGGCA TGGACAACGA GGCGGGTACC CTCCAGGGGC TGATCGACAA GGCCGACAAG
CGCATCGCCG AGATCCGCTC CGGTGAGAAG CCGGCCCTGT CGCCCGACGA CAGCGCCAAG
TATTACGCCG AAGTGGTGGT CGATCTCGAC GAGATCAACG AGCCGATGAT TGCCGACCCG
GACGTCAACA ACGAGGACGT CTCCAAGCGC TACACCCACG ACACCATCCG TCCGATCTCT
TTCTATAACG CAGAGAAAAA GGTCGATCTT GGCTTTGTGG GCTCCTGCAT GGTGCACAAG
GGAGACATGA AGATCGTGGC GCAGATGCTC AAGAACCTCG AGAAAGCCAA CGGCAAGGTC
GAGTTCAAGG CTCCGCTCGT GGTGGCCGCG CCGACCTACA ACATCATCGA CGAGATGAAG
GCCGAAGGTG ACTGGGAGAT CCTGCAGAAA TACTCGGGCT TTGAGTTCGA CGATCTGTTC
CCGAAATCGC AGGCGCGGAC CGAGTATGAA AACATCCTCT ATCTGGAGCG TCCGGGCTGT
AACCTCTGCA TGGGCAACCA GGAAAAGGCC GCCAAGGGTG ACACCGTTCT GGCCACATCG
ACCCGCCTGT TCCAGGGCCG TGTGGTGGAA GATGCCGCCG AGAAGAAAGG CGAGAGCCTT
CTTGCCTCGA CCCCGGTTGT GGTGCTCTCG GCCATTCTGG GTCGCACGCC AACGATCGAG
GAATACAAGA CCGCCGTGGA GGGTATTGAC CTCACCAAAT TTGCCCCTCC GGTCGAAAAA
CCGGCAGGAA CGCGCTCGGC GCATTTCTAA
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| Protein sequence | MSLYTDYLNE IETRKGEGLH PKPIDDGALV AELIAQIKDT GSEHREDSLK FFIYNTLPGT
TSAAGVKAAF LKEIILGEAE VAEITPEFAF ELLSHMKGGP SVEVLLDLAL GEDAGIAQQA
ADVLKTQVFL YEADTDRLEA AYKAGNAIAR EILESYAKAE FFTKLPDVDD EIKVVTYIAA
EGDISTDLLS PGNQAHSRSD RELHGKCMIS EAAQKEIEAL KLQHPDKRVM LIAEKGTMGV
GSSRMSGVNN VALWTGKQAS PYVPFVNYAP VVAGTNGISP IFLTTVGVTG GIGLDLKNWV
KKVDSDGKAI LNNDGNPVLE QKYSVETGTV LKIDTKNKKL LSEDGEELVD VSSAFTPQKV
EFMKAGSSYA IVFGKKLQTF AAETLGIEAP LVFAPAKEVS HEGQGLTAVE KIFNRNAVGS
TPGKTLHAGS DVRVKVNIVG SQDTTGLMTS QELEAMAATV ISPTVDGAYQ SGCHTASVWD
KKAQANIPRL MKFMNNFGLI TARDPKDQYH AMTDVIHKVL NDLTVDDWDI IIGGDSHTRM
SKGVAFGADS GTVALALATG EATMPIPESV KVTFKGKMAD HMDFRDVVHA TQAQMLKQHG
DNVFQGRVIE VHIGTLLADQ AFTFTDWTAE MKAKASICIS NDDTLIGSLE LAKSRIQIMI
DKGMDNEAGT LQGLIDKADK RIAEIRSGEK PALSPDDSAK YYAEVVVDLD EINEPMIADP
DVNNEDVSKR YTHDTIRPIS FYNAEKKVDL GFVGSCMVHK GDMKIVAQML KNLEKANGKV
EFKAPLVVAA PTYNIIDEMK AEGDWEILQK YSGFEFDDLF PKSQARTEYE NILYLERPGC
NLCMGNQEKA AKGDTVLATS TRLFQGRVVE DAAEKKGESL LASTPVVVLS AILGRTPTIE
EYKTAVEGID LTKFAPPVEK PAGTRSAHF
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