Gene TM1040_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1023 
Symbol 
ID4078535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1094869 
End bp1095207 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content55% 
IMG OID638006327 
Productnitrogen regulatory protein P-II 
Protein accessionYP_613018 
Protein GI99080864 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.350926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCGAAGCCAT CATCAAGCCG TTCAAGCTCG ACGAGGTGAA AGAAGCGCTG 
CAGGACGTCG GCGTTCAGGG TCTCTCTGTC ATCGAGGTTA AGGGCTTTGG TCGTCAAAAA
GGCCATACCG AGCTTTATCG CGGAGCAGAA TATGTCGTGG ACTTTCTGCC CAAGGTAAAA
ATCGAAGTGG TGCTCGACGA CGATCAGGTG GACGCCGCCA TCGAGGCGAT CGTGGCAGCG
GCCAAGACCG ACAAGATCGG CGATGGCAAG ATTTTTGTCA GCCCGGTTGA ACAGGCCATC
CGCATTCGGA CCGGTGAAGC CGGCTCTGAC GCCCTTTAA
 
Protein sequence
MKKIEAIIKP FKLDEVKEAL QDVGVQGLSV IEVKGFGRQK GHTELYRGAE YVVDFLPKVK 
IEVVLDDDQV DAAIEAIVAA AKTDKIGDGK IFVSPVEQAI RIRTGEAGSD AL