| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1006 |
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| Symbol | |
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| ID | 4078226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1075536 |
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| End bp | 1078283 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006310 |
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| Product | aconitate hydratase |
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| Protein accession | YP_613001 |
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| Protein GI | 99080847 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.304321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATCA CCGTCGGACA GGACACAGCC AAAACACGCA AAACATTGAG CGTGAACGGA
AAATCTATTT CTTATTACTC CATTCCAGCC GCAACAGACG CCGGATATGG TGATTTCACC
AAACTGCCTG CAGCCCTGAA AGTGGTGCTT GAGAACCTCT TGAGGTTTGA AGATGGCGGT
TTTTCGGTCT CGACCGACGA CATCAAGGCG TTTGGCGACT GGGCCAAAAA CGGCGGGAAG
AACCCGCGCG AGATCGCCTA TCGCCCGGCG CGCGTCCTGA TGCAGGACTT CACCGGTGTG
CCTGCGGTGG TCGATCTGGC CGCGATGCGT GACGGGATCA AGACCCTTGG CGGGGATGCC
AACAAGATCA ACCCGCTGGT GCCTGTCGAT CTGGTGATCG ACCACTCGGT GATGATCGAC
GAATTTGGCA ACCCGCGCGC CTTTCAGATG AATGTGGACC GCGAATATGA GCGCAATATG
GAGCGCTACC AATTCCTGAA ATGGGGCCAA GGCGCGTTCA ACAACTTCCG CGTGGTGCCA
CCCGGCACCG GCATCTGCCA TCAGGTGAAC CTTGAATATC TGGCCCAGAC CGTCTGGTCA
GATGTTGACC AAAACGGCGA GGAAGTGGCG TATCCGGATA CGCTTGTGGG CACCGACAGC
CACACCACCA TGGTCAATGG CGCGGCTGTG CTTGGCTGGG GCGTGGGCGG GATCGAGGCC
GAGGCCGCGA TGCTAGGCCA GCCGATCTCC ATGCTGATCC CCGAGGTTGT GGGTTTTGAA
CTGACCGGCG AGATGGTTGA AGGCACCACC GGCACAGACC TTGTACTCAA GGTGGTGGAG
ATGCTGCGCG AGCTCGGCGT GGTGGGCAAA TTCGTGGAAT TCTATGGCTC TGGCCTCGAC
AACCTGCCGC TGGCGGATCG TGCCACCATT GCCAATATGG CACCGGAATA TGGCGCCACC
TGCGGCTTTT TCCCGATCGA CAAGGAAACC ATCCGCTACC TGCGCAACAC CGGCCGCGAC
GAGGACCGCA TTGCGCTGGT TGAAACCTAC GCCAAGGAAA ACGGTTTCTG GCGCGATGAG
ACCTACGCGC CGATTTACAC CGAGACACTG AGCCTCGACA TGGGCACCAT CGTGCCGGCA
ATCTCTGGCC CCAAACGCCC GCAGGACTAT GTGGCGCTGG ACGGCGCAGC GCAGGCCTTC
AAACAGGTGG TATCGGAGTA TCGCGGTGTG GATGCGTCAG CCAACGCAGC CGAGATGGCG
TCAGAGGGCC CTGCCCCGAC CGCACCGGTG GATCCGTGCA AATCGCACCC CGTCAAAGGC
GAAGACTTTG CGTTGCGCGA CGGCTCGGTG GTGATTGCCT CCATCACCTC CTGCACCAAT
ACCTCAAACC CCTATGTGAT GATCGGGGCC GGTCTGGTGG CGAAAAAGGC GCATGAACTG
GGCCTCAACC GCAAACCCTG GGTCAAAACC TCGCTGGCTC CGGGCTCTCA GGTGGTCTCG
GCATACCTTG AGGCCGCAGG CCTGCAAGAG CATCTGGATG CGATCGGGTT CAACCTCGTG
GGCTATGGCT GCACCACCTG TATCGGCAAC TCCGGCCCGA TCCAGAAAGA GTTCTCCGAG
GCGATTGCCG AGGGCGATCT GGTCGCCACC TCGGTGCTGT CGGGCAACCG CAACTTTGAG
GGCCGCATCA GCCCGGATGT GCGCGCCAAC TACCTCGCCT CGCCGCCGCT GGTGGTCGCC
TATGCGTTGG CGGGCGACAT GAACGTGGAT CTCGCACGCG ATCCGCTCGG CCAGGACAAA
GACGGCAATG ACGTCTACCT GAAGGACATC TGGCCCACCC AGAAGGAAAT CGCCGATCTG
GTCGAGGCCA CTGTGACCCG CGAGGCGTTT CAGTCCAAAT ACGCCGATGT CTTCAAGGGT
GACGAAAAAT GGCAAAGCGT GGAGACCACT GAGGCCGAGA CGTACGACTG GCCCGCTGCC
TCGACGTATA TTCAAAACCC GCCCTATTTT CAGGGCATGG GCCCAGAGCC GGGCAAGATT
CAGGACGTCA TCGGCGCCAA GCCTCTGTTG ATTCTCGGGG ATATGGTCAC CACCGACCAT
ATCTCTCCGG CGGGGTCTTT TGCGACCACC ACACCGGCGG GCAAATACCT GCTGGACCGT
CAGGTGCAGC CGCGCGAGTT CAACTCTTAT GGCTCGCGTC GCGGCAACCA CGAGATCATG
ATGCGCGGCA CCTTCGCCAA TATCCGCATC AAGAACGAGA TGCTCGACGG TGTTGAGGGC
GGCTATACCA AAGGTCCAGA TGGTGCGCAG ACCTCGGTCT ATGAGGCGTC GATGGCGCAT
CACGAGGCTG GCACCCCGCT GGTGGTGTTT GGCGGCGAAC AATATGGCGC CGGATCCTCG
CGTGACTGGG CGGCCAAGGG CACCGCGCTC TTGGGGGTGA AGGCCGTTAT TGCCGAGAGT
TTCGAGCGTA TTCACCGCTC CAACCTTGTG GGCATGGGCG TCATCCCGTT CGAGTTCACC
GGAGGCGACA CCCGCAAATC GCTCAAGCTC ACCGGCGATG AAACGGTTGA CATTCGGGGT
CTGGAGACCG TGACACCGCT GCAGGAGGTC GAGTGCGACA TCACCTATGG CGACGGCAGC
AAAAAGACCA TCACCTTGAA GTGCCGCATC GATACCGCGC CAGAGATCGA ATACATCGAG
AACGGCGGCG TGCTGCACTA TGTGCTGCGC AACCTGGCCA AGAGCTGA
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| Protein sequence | MPITVGQDTA KTRKTLSVNG KSISYYSIPA ATDAGYGDFT KLPAALKVVL ENLLRFEDGG
FSVSTDDIKA FGDWAKNGGK NPREIAYRPA RVLMQDFTGV PAVVDLAAMR DGIKTLGGDA
NKINPLVPVD LVIDHSVMID EFGNPRAFQM NVDREYERNM ERYQFLKWGQ GAFNNFRVVP
PGTGICHQVN LEYLAQTVWS DVDQNGEEVA YPDTLVGTDS HTTMVNGAAV LGWGVGGIEA
EAAMLGQPIS MLIPEVVGFE LTGEMVEGTT GTDLVLKVVE MLRELGVVGK FVEFYGSGLD
NLPLADRATI ANMAPEYGAT CGFFPIDKET IRYLRNTGRD EDRIALVETY AKENGFWRDE
TYAPIYTETL SLDMGTIVPA ISGPKRPQDY VALDGAAQAF KQVVSEYRGV DASANAAEMA
SEGPAPTAPV DPCKSHPVKG EDFALRDGSV VIASITSCTN TSNPYVMIGA GLVAKKAHEL
GLNRKPWVKT SLAPGSQVVS AYLEAAGLQE HLDAIGFNLV GYGCTTCIGN SGPIQKEFSE
AIAEGDLVAT SVLSGNRNFE GRISPDVRAN YLASPPLVVA YALAGDMNVD LARDPLGQDK
DGNDVYLKDI WPTQKEIADL VEATVTREAF QSKYADVFKG DEKWQSVETT EAETYDWPAA
STYIQNPPYF QGMGPEPGKI QDVIGAKPLL ILGDMVTTDH ISPAGSFATT TPAGKYLLDR
QVQPREFNSY GSRRGNHEIM MRGTFANIRI KNEMLDGVEG GYTKGPDGAQ TSVYEASMAH
HEAGTPLVVF GGEQYGAGSS RDWAAKGTAL LGVKAVIAES FERIHRSNLV GMGVIPFEFT
GGDTRKSLKL TGDETVDIRG LETVTPLQEV ECDITYGDGS KKTITLKCRI DTAPEIEYIE
NGGVLHYVLR NLAKS
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