| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1003 |
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| Symbol | |
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| ID | 4078223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1073620 |
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| End bp | 1074156 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006307 |
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| Product | periplasmic protein thiol |
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| Protein accession | YP_612998 |
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| Protein GI | 99080844 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0767014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA TCTCTTTGAT GATGGCTATT CCAGTGGTCG TCTTTTCCGG CTTTGTTGGC
CTTGCCCTCG TGGGCATGGG CCGCGACGAT CCCGAAAGCC TGCCCTCGGC GCGCGAAGGC
AAAGCAGCGC CCTCCGTCGC GCTCAGCGAT TTTCCCGGCA AAGAGAGCTT TGACGACGCC
ACCCTGCGCG ACGGCACCGT AAAGCTTGTC AATTACTGGG CGAGCTGGTG TGGCCCCTGC
CGCGCCGAAC ACCCGAGCCT GACCGCGCTT TCCGAGGAAG GCGTGCCGAT CTACGGCGTG
AACTACAAGG ATCAGCTGGC CAATGCCCAG AGTTTCCTCG AGGAACTCGG CGATCCCTAT
GCCGGTGTGG GTCGGGATGA ACAGGGGCGT ATGGCGCTGG ATTGGGGGCT GTATGGCGTG
CCCGAAACGT ATGTCATCGA CGGCGACGGC ACGGTGGTTC TGCGCTTTGC CGGGCCGATT
ACCAGCCGGG TTCTGGAAGA GACCATTCGC CCCGCCATGG AGCGCGCGGC CCAGTAA
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| Protein sequence | MAKISLMMAI PVVVFSGFVG LALVGMGRDD PESLPSAREG KAAPSVALSD FPGKESFDDA
TLRDGTVKLV NYWASWCGPC RAEHPSLTAL SEEGVPIYGV NYKDQLANAQ SFLEELGDPY
AGVGRDEQGR MALDWGLYGV PETYVIDGDG TVVLRFAGPI TSRVLEETIR PAMERAAQ
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