| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1001 |
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| Symbol | |
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| ID | 4078221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1072745 |
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| End bp | 1073479 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006305 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_612996 |
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| Protein GI | 99080842 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.114267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCT GGGAATACGC CAATCCAAAG AAATTCCTGC GCACCAGTGA GCGTGTGCTG
CCTGCCCTTT GGGGCATTTC AGCTCTGCTC ATCGTGAGCG GGCTGATCTG GGGGTTCTTT
TTTACACCCG ATGATTACCG CCAGGGTTCG ACGGTCAAGA TCATCTATCT GCATGTGCCT
GCGGCGCTGA TGGCGATCAA CGCCTGGTTC ATGATGCTGG TGGCCTCGCT GATCTGGGTG
ATCCGCCGAC ATCACGTAAG CGCACTGGCG GCGAAGGCAG CCGCGCCCGT GGGCGTTGTG
ATGACACTGA TTGCCCTCGT TACCGGCGCC ATCTGGGGGC AACCGATGTG GGGCACCTGG
TGGGCGTGGG ACCCGCGGCT AACGTCCTTT CTGGTGCTGT TCCTGTTCTA CATTGGCTAT
ATCGCGCTCT GGGAAGCGAT CGAGAATGGC GATACCGCAG CGGATCTGGC GTCGATCCTC
TGCCTTGTGG GGTCTGTTTT TGCGGTGCTC TCGCGGTATG CGGTGAATTT CTGGAATCAG
GGCCTGCACC AGGGGGCGTC GCTGTCGCTC GACAAGGAAG AAAACGTCGC CGATGTCTTT
GCCTTTCCGC TCTATACCTG CATGGCCGGG TTCGGGGCGC TGTTTATCGC GCTGGTGCTC
TATCGCACCG GTACCGAGAT CCGCGCGCGC CGGATGTCGG CGCTGATCGC ACGCGAAAGG
ATGATGGATG CCTGA
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| Protein sequence | MSIWEYANPK KFLRTSERVL PALWGISALL IVSGLIWGFF FTPDDYRQGS TVKIIYLHVP
AALMAINAWF MMLVASLIWV IRRHHVSALA AKAAAPVGVV MTLIALVTGA IWGQPMWGTW
WAWDPRLTSF LVLFLFYIGY IALWEAIENG DTAADLASIL CLVGSVFAVL SRYAVNFWNQ
GLHQGASLSL DKEENVADVF AFPLYTCMAG FGALFIALVL YRTGTEIRAR RMSALIARER
MMDA
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