| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1000 |
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| Symbol | |
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| ID | 4078220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1072044 |
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| End bp | 1072700 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006304 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_612995 |
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| Protein GI | 99080841 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.298258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGCAC TCTTGATGCG GGATCTGCGG CTGGCGTTGC GGGCCGGGGG AGGATTTGGG
CTTGGGCTTG CGTTTTTCCT GATCGTGACC GTGATGGTGC CTTTCTCGGT CGGCCCCGAG
GCCGAGACAT TGGCAAAGAT TGCACCGGGC GTTTTATGGC TCGGGGCCTT GCTGGCGTGT
CTGTTGTCGC TCGATCGTCT TCTGGCGCTG GATTGGGAGG ATGGCTCGCT GGACCTTTTG
GCCACGGCCC CGCTGCCGCT TGAAGGGGTC CTCAGCATCA AGGCACTGGC ACATTGGTTG
ACCACGGGGC TGCCCCTGGT GCTGGCAGCC CCCGTGCTGG GCGTCCTGCT CGGCCTTCCG
GCGGGCGGCT ATCTCTGGAT CACGCTGTCG CTTTTGCTGG GCACGCCGGC ACTTTCGGTT
GTGGGTACGT TTGGCGCGGC CCTGACCGTC GGGCTTAAGC GGGGCGGTTT GTTGTTGTCG
CTGCTGGTGA TGCCGCTCTA TGTGCCGACC CTGATCTTTG GCGCCGAAGT GGCGCGTCGG
GGAGCGGCGG GGCTTGCGGT AGAAACCCCC ATGTTGATGC TTGGGGGGAT CACCCTTGGC
ACCATCGCCC TGTTGCCCTT TGCCTCCGCT GCCGTCCTGC GCGTCAATTT GCGCTAG
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| Protein sequence | MIALLMRDLR LALRAGGGFG LGLAFFLIVT VMVPFSVGPE AETLAKIAPG VLWLGALLAC
LLSLDRLLAL DWEDGSLDLL ATAPLPLEGV LSIKALAHWL TTGLPLVLAA PVLGVLLGLP
AGGYLWITLS LLLGTPALSV VGTFGAALTV GLKRGGLLLS LLVMPLYVPT LIFGAEVARR
GAAGLAVETP MLMLGGITLG TIALLPFASA AVLRVNLR
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