| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0997 |
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| Symbol | secF |
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| ID | 4078159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1069779 |
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| End bp | 1070747 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006301 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_612992 |
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| Protein GI | 99080838 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGA AACTGGTTCG CGAAGGCACC TCCTTCGACT TCTTCAGGCT CTGGAAGCTC
TGGCTCGGCA TCTCGGCGAT GATGGTTGTG ATCGGCTTTG CCTCCTTTGC CATCCAGGGG
CTGAACTTTG GGATCGACTT TCGGGGCGGT ACCACCATCC GCACCGAGGC GACGCAGGAT
CTCGACATCG GCGTCTACCG CGAGGCCATC GCGCCTCTGG AGCTAGGTGA CATCACCATC
ACCGAGGTGT TTGATCCAAC TTTTGACGAA GATCAGCATG TCGCCATGAT CCGCATTGAG
GCGCAGGAAG ATGGCGAGGC GCTCTCCAGC GATGTGATCG CAGCGGTGCA GGGCGCGCTC
GACGCGGTGG CGCCGGGGAT CAAGTTCATC TCTGTCGAAA GCGTCGGGCC CAAGGTCTCG
GGCGAGTTGG TGCAAACGGC CGTGATCGCG GTGGCCTTGG CGATTGGCGC GGTTCTGATC
TACATCTGGC TGCGGTTCGA GTGGCAGTTT GCCCTCGGCG CGGTGGCCGC CCTTGTGCAT
GACGTCATCC TGACCATCGG CGTGTTCTCG GAACTGCAGA TCAAATTCGA TCTGGCCATC
ATCGCGGCGC TCCTGACCAT CGTGGGGTAT TCGCTGAATG ATACGGTGGT CGTGTTTGAC
CGCGTGCGCG AGAACCTGCG TCGCTACAAG AAAAAGCCGC TGGCCGAGGT GCTCAATATC
TCGATCAACG AGACCCTGAG CCGAACCGTG ATGACCTCGG TGACAACGCT TCTGGCCTTG
ATCTCGCTCT ATGTTCTGGG CGGCGATGTG ATCCGCGGGT TTGTCTTTGC GATGATCTGG
GGCGTTATCG TCGGCACCTA TTCGTCGATC TTTGTGGCCT CCACGATCCT GTTGTGGCTT
GGCGTGAAGC GCGACTGGAG CAAGAACAAC GACACCACCG GAAATCAGTT CGCCAATATT
GACGCCTGA
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| Protein sequence | MRLKLVREGT SFDFFRLWKL WLGISAMMVV IGFASFAIQG LNFGIDFRGG TTIRTEATQD
LDIGVYREAI APLELGDITI TEVFDPTFDE DQHVAMIRIE AQEDGEALSS DVIAAVQGAL
DAVAPGIKFI SVESVGPKVS GELVQTAVIA VALAIGAVLI YIWLRFEWQF ALGAVAALVH
DVILTIGVFS ELQIKFDLAI IAALLTIVGY SLNDTVVVFD RVRENLRRYK KKPLAEVLNI
SINETLSRTV MTSVTTLLAL ISLYVLGGDV IRGFVFAMIW GVIVGTYSSI FVASTILLWL
GVKRDWSKNN DTTGNQFANI DA
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