Gene TM1040_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0981 
Symbol 
ID4078143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1049409 
End bp1049657 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content60% 
IMG OID638006284 
Productcalcium-binding EF-hand 
Protein accessionYP_612976 
Protein GI99080822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TCGCCCAGAT TGCCACCGCG ATTGTGATGA CGGCCGCGGC CCCGGTCACT 
GCCCAGAATT TTGCCGTCGA AGTTGATGCC GATGGCAATG GCACCCTGTC GTTTGAAGAG
CTGCGACTGG CCTATCCTGC CCTGACAGAA GAGGTTTTTG CGCAGGTAGA CCTCGACGCC
AGTGGAGGGG CGGACCTCGA GGAGGTCATC GCAGCGCAGG AGGCAGGCCT TCTGGTGATC
AACGGCTGA
 
Protein sequence
MKTIAQIATA IVMTAAAPVT AQNFAVEVDA DGNGTLSFEE LRLAYPALTE EVFAQVDLDA 
SGGADLEEVI AAQEAGLLVI NG