| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0963 |
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| Symbol | |
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| ID | 4077259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1030665 |
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| End bp | 1031591 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638006266 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_612958 |
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| Protein GI | 99080804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAT CGCACGCTGT CGTTCACTCC GCTTTGGCTG ATGAAGCCAG CCAACATAAC
AACACCTTGT CCTGGTTTGA CATTACGCCT GCCGATCAAG AGCGGGTACG ATCGCTTGCC
CCCATCGCGG ACCACGTTGG CGAGGAGATC ATTGCAGATT TCTATGCGCA TATTCTGCGG
TTTGAGGACG CGGCCCAACA ATTTGCGGAC GACACGCAAA TCGAGCGTGT AAAACGCGGC
CAAAAGAAAT ATTTTCAAGA GCTGATCAAC GCCGAGCTTG ACGAGTCCTA TGCCGAGGAA
CGCAAGCGGA TCGGTGGCAT TCACGAACGT GCAGGTATCA CGCCCACGCT CTATGTTGGC
TCTTACGCCT ACTACCTGCA ACGACTGAGC CAGTCTATTC TCGAGAACGG GAAGGAGGAT
CCGCACAAGC TCTTTGGCCT TGTGCTCTCG ATGATGAAGA TTGCTCATTA CGACATGGCG
CTCGCCCTGG AAACCTACGT CGAGGCGCGC GAAAAGACGA TTGAAATCCA CGAGCGGCAG
ATGCGCGAGC TGCCCACGCC GGTTCTGGAA CTGCGCGAGG GCCTGCTGCT GGTGCCCGTT
GTTGGTGCGC TGGACAGTCA TCGCGCCAGA ACGTTGACGA TGCAACTGTT GGATGGGATT
CGGGATACAC GAAGTCGCGC GGTGGTGCTC GACATTACAG GTGCCGTTTC CATCGACAGC
AGCGTTGCAA ACCATCTGTT TCAGGCCATG ACAGCAGCGC GGCTCATGGG CGCAAAGTCC
ATCCTCGCCG GGATCTCTCC GACTGTTGCG CAAGAGTTGT TTCGGATCGG CGTTGATACC
AAGACCTTTA CCACAGCCAG AAACCTGCAG CAGGGGATCG AGCTCGCGGC CTCCGCGCTT
GAGGCGCATT CCAAGCACTC GGTCTAA
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| Protein sequence | MSKSHAVVHS ALADEASQHN NTLSWFDITP ADQERVRSLA PIADHVGEEI IADFYAHILR
FEDAAQQFAD DTQIERVKRG QKKYFQELIN AELDESYAEE RKRIGGIHER AGITPTLYVG
SYAYYLQRLS QSILENGKED PHKLFGLVLS MMKIAHYDMA LALETYVEAR EKTIEIHERQ
MRELPTPVLE LREGLLLVPV VGALDSHRAR TLTMQLLDGI RDTRSRAVVL DITGAVSIDS
SVANHLFQAM TAARLMGAKS ILAGISPTVA QELFRIGVDT KTFTTARNLQ QGIELAASAL
EAHSKHSV
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