| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0952 |
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| Symbol | |
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| ID | 4077346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1016672 |
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| End bp | 1017253 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006255 |
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| Product | hypothetical protein |
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| Protein accession | YP_612947 |
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| Protein GI | 99080793 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0256489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAG ACGATATTGG CCAGCTGATC TATCTGGTGC TGCTGCTTCT GGTGGTGGGC
TCCTGGGTCT TTGTGCAAAA CCGCCAGAGC CTTGGAAAAA CCGCACAACA ACTCATGATC
TGGGCCCTGA TCTTTCTGGG CGTGATTGCG GCCTATGGGC TTTGGGATGA CATCCGAACA
ACGGTGGTGC CACAGCAGGC AGTTCTTTCG GACGACGGCC AGATCCGCGT CCCCCGTGCC
CGCGATGGTC ACTATTACCT CACTTTGCAG GTCAATGATC AGCCGGTTCA ATTCCTGGTC
GATACCGGTG CCAGCGATAT GGTGCTCAAT GCCGACACCG CTGAGCGCCT CGGGATCGAT
CCCAGTGCGC TGAGCTACTT TGGACGCGCC ATGACGGCAA ATGGCGAAGT ACGCACCGCG
CGCGTGACTC TCGATACCGT TGCCTTGGGG CCGATCACGG ATCGCGATGT GTCGGCCTGG
GTCAACGAGG GCGCGTTGGC GCAGTCTCTC CTGGGAATGG GATATCTTCA GCGGTTCTCG
GGGTTTGAAA TTCGCAACAA TGAACTGATC CTGACCCGTT GA
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| Protein sequence | MNSDDIGQLI YLVLLLLVVG SWVFVQNRQS LGKTAQQLMI WALIFLGVIA AYGLWDDIRT
TVVPQQAVLS DDGQIRVPRA RDGHYYLTLQ VNDQPVQFLV DTGASDMVLN ADTAERLGID
PSALSYFGRA MTANGEVRTA RVTLDTVALG PITDRDVSAW VNEGALAQSL LGMGYLQRFS
GFEIRNNELI LTR
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