| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0948 |
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| Symbol | |
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| ID | 4077342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1012011 |
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| End bp | 1013117 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006251 |
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| Product | permease YjgP/YjgQ |
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| Protein accession | YP_612943 |
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| Protein GI | 99080789 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.046524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTTG ATCTCTATTA TGCCCGCCGC TTCTTGCAAT GGTTCATGGT GATCGCCGCC
GTCCTCATGA GTCTGGTGAT GCTGATCGAC CTCAGCGAAC AATTCCGCCG CTTTGACGCG
CAAGACCTGC GGTTTGGGCA GTTGTTGGAG CTGACACTGC TCAATGCGCC CGCAGCCTTT
AGCGAGTTCC TGCCGCTCAT CATGATCCTG ACCACGATTG TGCTTTTTGT CGGCATGGCA
CGCAGCAGCG AGCTGGTGGT CACACGCGCG ATCGGGCGCT CGGGGATCCG GGCCCTCGTG
CCGCCAGTGG TGGTGGCGCT GGTGCTGGGG GGGCTTGCGG TCAGCACGCT CAATCCCATC
GTCGCGGCGA CCACAAACCG GTTTGAGACC CTCTCGGAAA GCTACCGCCA GACCGGTGGC
CCCGCCGCAG TTTCGCTGAG CGGAGAAGGC CTTTGGCTGC GTCAGGGGGG ACAGAACGGA
CAGTCGGTTA TTCACGCTGC CAACTACCGG GGCGATGCCG AGAACCTCTA TCTCTACGAT
GTTTCGATCC TGACCTACGC GCCCGATGGC GGCCCAACGC GGCGGACCGT TGCCGCCGAA
GCGCGCCTTG AAGGCGATGA TTGGGTGCTG CGCGATGCAA AAGTCTGGCA GCTGATCCTT
GGTGTGAACC CCGAACGCAG CGCCAAACGC TATGACGAGC TGCGCCTGCC CACCACGCTC
ACCAATGAGC GTATTCGCGA CACGCTTGGC TATGCGGAGG GGATTTCGAT TTATGACCTG
CCCCAGACGA TCCAGTCTCT CTCCGAGGCC GGGTTTTCAA CCACCCGTTT CCAGGTCTGG
CTGCAAGTCG AACTGGCACG CCCCCTGTTT CTGGTGGCAA TGGTGCTGGT GGGCGCTGCC
TTTACCATGC GCCACACCCG CCTTGGCGGG ACTGGCGTTG CCGTGCTGAC CTCGGTTCTC
CTGGGGTTTG CGCTTTACTT TGTCCATAAT TTCGCGCGGA TATTGGGCGA AAACGGGCAG
ATTCCGATCT TGCTGGCCGC CTGGGCGCCG CCGGTGGCCT CGATACTATT GACGATGGGA
TTGCTCCTGC ATGCCGAAGA CGGTTGA
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| Protein sequence | MILDLYYARR FLQWFMVIAA VLMSLVMLID LSEQFRRFDA QDLRFGQLLE LTLLNAPAAF
SEFLPLIMIL TTIVLFVGMA RSSELVVTRA IGRSGIRALV PPVVVALVLG GLAVSTLNPI
VAATTNRFET LSESYRQTGG PAAVSLSGEG LWLRQGGQNG QSVIHAANYR GDAENLYLYD
VSILTYAPDG GPTRRTVAAE ARLEGDDWVL RDAKVWQLIL GVNPERSAKR YDELRLPTTL
TNERIRDTLG YAEGISIYDL PQTIQSLSEA GFSTTRFQVW LQVELARPLF LVAMVLVGAA
FTMRHTRLGG TGVAVLTSVL LGFALYFVHN FARILGENGQ IPILLAAWAP PVASILLTMG
LLLHAEDG
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