| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0947 |
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| Symbol | |
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| ID | 4077341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1009832 |
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| End bp | 1012027 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006250 |
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| Product | organic solvent tolerance protein |
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| Protein accession | YP_612942 |
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| Protein GI | 99080788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0025554 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.755835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA CGGTTGAATT GAAGAAACGG CGGCGAGGCG CGCTGCTGCG GACGGTGGTA
CCCCTGTGGT TGGCGCTTGC GGCAGCGCCC GCCCTGGCGC AAAACGCGAC CTCTGCACAG
GAAACCCCAG CCCCGGCGAT GCTGGTGGCG GACCGGGTAT TTGTATCCCC CGACCGCAAG
CTGGTAGCCG AAGGAAATGT CGAGGCATTT CAGGGCGATA TCCGCCTTCA GGCGCGGCGC
ATCTCTTATG ATCGCCAAAC CGGCATCCTT CAGATGGAGG GGCCGATCCG CATAGACCAG
AGCGGCTCGA TCACGGTACT CGCCAATGCC GCCGAGCTGG ACAGTGAATT GCGCAATGGC
ATCCTGCGTG GGGCGCGGAT GGTCTTTGAT CAGCAGGTGC AGCTCGCAGC CCTGCAGATG
ACCCGCGTCG AGGGGCGCTA TTCGCAGCTC TACAAGACCG CCGTGACCTC TTGCCATGTT
TGCGAAGATG GCAGCCCCCC GCTCTGGCAG ATCCGCGCCG AGCGCATCAC CCATGATCAG
GCTGAGCGCC AGCTCTATCT GGAGGGTGCG CAGCTGATGG TGAAAGATGT TCCGGTCTTT
TACTTTCCCG CACTGCGCCT GCCAGACCCA ACACTCGAGC GGGCTGATGG CTTTCTGGTG
CCCTCTCTCT CCAGTTCCTC GACGCTTGGC GTAGGGGTGA AGATCCCCTA TTTCAAAACA
ATCGGCCCGC ACAGAGACCT CACCATCACG CCCTACCTGT CCGAGAAGAC CAGAACGCTC
GACCTGCGCT ACCGTCAGGC CTTTCGCAAC GGCCAGATCG AGATCACCGG CGCCTTCAGC
CGCGATGACA TTCAGCCTGA TGATGGCCGG GGCTACCTCA GCCTGCGCGG CGCCTTCGAC
ATCCCGCGAG ACTTCAAGCT GAGCTTTGAT CTGAACACTG TCTCGGATGA CGGATACTAC
GCTGACTATG ACATCTCTGA CACCGACCGC ATTCGCTCCG AAATCTCGCT GATCCGGGTG
CGGCGCGACC AGCTGATCGA AGGCAAGATC TCCAACTACA AAACCCTGCG CGACGCCGAG
AACCAGGACT TCATTCCCTC GACCATCGTG ACCGGCACCT TCGAGCAGCG CCTCTTTCCC
AAGGCCGTTG GCGGCGAGCT CCGTCTGCGG CTCAACGCCT CGCAATTCAG ACGCGAATCC
TCGCTTGATG CCACCCTCAC AGATGCCAAC GGGCGCGACA TGAGCCGGGT TTCCGCCGAT
GCCACCTGGC TGCGCAGCTG GATTTTGCCC TGGGGGATTG AATCGGTCTG GACCGCCGGG
ATCGGGATCG ACAGTTTTGC GCTGTCAGAT GATGCAGCCT TTGACAATGA TGCCACCCGC
GTCACGCCCA AGGCGGCGCT GACCCTGCGC CGCCCGATGA CACGCCAGAC CGCATCAGGG
GCGGTTCAGG TGCTCGAGCC CATCGTGCAG CTTGGCTGGA CCCATGTGAA TGGCGACGAC
ACCCCGAATG AGGCCAGCAA TATCTCCGAG TTCGATCAGG GCAACCTGAT GGCGCTCTCG
CGGTTCCCCG AATCCGACGT GCGCGAGGAT GGCGAGACGT TTGTTTACGG CGTGAACTTT
GCGCATTTCG ACACCTCCGG CTGGTTTGCA ACAGGTACCA TTGCGCAGAT CCACCGCGAT
CAAGCGCAAT CGGGCTTTAC CTCCTCCTCG GGGCTGGATG GCCGCAACTC CAACGTCTTG
GTGGCGGGGC AGCTGGGCCT GCGCAACGAC CTGACGCTGA CCGCCCGCAC CCTCTTTGAC
GAGGAGTGGT CGGTGACCAA GGCAGAGTTT CGCGGCGATC TGGAACGTGA CCGGGTCAGT
CTTGCAGGGA GCTATCTTTG GTTGCAGGCC GACGCGAGCG AGAACCGCAC GGAAGAAACC
TCGGAACTCT GGTTCGATGG CACCTATGAC TTGAACCAGA CATGGCGCGC GGGCGCCAAC
ATGCGCTACG ACATTACCGA TGGGCGCGCG ACCCGTGCAG GTCTTGGCCT CACCTACAGC
AATGAATGCG TGACACTCGA CCTATCGCTC AGCCGTCGCT ATACCTCGAC GACAAGTGTT
GAGCCATCAA CGGATTTCGG ATTTACACTG TCGCTCAACG GCTTTTCCGT CAAAAGCGGC
AACACAACAA GCAGGCGATC ATGCAGCAAA ACCTAA
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| Protein sequence | MPKTVELKKR RRGALLRTVV PLWLALAAAP ALAQNATSAQ ETPAPAMLVA DRVFVSPDRK
LVAEGNVEAF QGDIRLQARR ISYDRQTGIL QMEGPIRIDQ SGSITVLANA AELDSELRNG
ILRGARMVFD QQVQLAALQM TRVEGRYSQL YKTAVTSCHV CEDGSPPLWQ IRAERITHDQ
AERQLYLEGA QLMVKDVPVF YFPALRLPDP TLERADGFLV PSLSSSSTLG VGVKIPYFKT
IGPHRDLTIT PYLSEKTRTL DLRYRQAFRN GQIEITGAFS RDDIQPDDGR GYLSLRGAFD
IPRDFKLSFD LNTVSDDGYY ADYDISDTDR IRSEISLIRV RRDQLIEGKI SNYKTLRDAE
NQDFIPSTIV TGTFEQRLFP KAVGGELRLR LNASQFRRES SLDATLTDAN GRDMSRVSAD
ATWLRSWILP WGIESVWTAG IGIDSFALSD DAAFDNDATR VTPKAALTLR RPMTRQTASG
AVQVLEPIVQ LGWTHVNGDD TPNEASNISE FDQGNLMALS RFPESDVRED GETFVYGVNF
AHFDTSGWFA TGTIAQIHRD QAQSGFTSSS GLDGRNSNVL VAGQLGLRND LTLTARTLFD
EEWSVTKAEF RGDLERDRVS LAGSYLWLQA DASENRTEET SELWFDGTYD LNQTWRAGAN
MRYDITDGRA TRAGLGLTYS NECVTLDLSL SRRYTSTTSV EPSTDFGFTL SLNGFSVKSG
NTTSRRSCSK T
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