Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0942 |
Symbol | |
ID | 4077336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1004793 |
End bp | 1005629 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006245 |
Product | HemK family modification methylase |
Protein accession | YP_612937 |
Protein GI | 99080783 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.452604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CCGCCGCACA AGCCATGGTG GCGGCAACGG CGCGCCTAAG AGCGGCGGGG GTAGAGGACC CCGCGCGCGA TGCGCGGGTG CTTTTGGCGC ATGCCGCGCG GATTGAGGCG GCGCGGGTCA CATTGATCGC GCCCGAGGAA CTCTCGCATG AGGTTGCCGA ACGCTATGAC CAGCTGATTT CCCTGCGCGC GATCCGGGTA CCCGTGTCGC ATCTCGTGGG CGAGCGGGAT TTCTATGGCC GCCGCTTCAA GGTCTCTGGC GATGTTCTGG ACCCGCGTCC CGAAACCGAA ACCCTGATCG AAGCGGCGCT TGCAGAGCCG TTCGAGCGGG TGCTGGATCT TGGGGTGGGG TCGGGCTGCA TTCTGGTGAC GCTCTTGGCA GAGCAGCAGC GCGCGCGCGG CCTTGGCGTG GACCTCAGTG AAGCCGCCTG TCTTCAGGCC AGCGCCAATG CGGTGTTGCA CCGCGTCGAG GCGCGTGCCG ACATCCGCCA GTCGAACTGG TTTTCCGCTG TTGAAGGGCA GTTTGACCTG ATTGTCTCCA ACCCGCCTTA TATTGCGCTT GAAGAAATGG ATGGGCTCTC GGCAGAGGTG CGCGATCATG AACCGCAAAT GGCGCTCACG GATGGGGCGG ATGGCCTCAG CGCGTATCGG CAAATCTGTG CAGGGCTTGC GCCGCATCTC GCAGCAAATG GGCGCGTGAT GGTAGAAATC GGCCCCACGC AAGGTCCGGC TGTTGCGCAG ATGATGCGCG AAACGGGGCT TCGCGATGTT AGCGTGCTGC CGGACCTGGA TGGTCGGGAT CGGGTCGTTT TTGGCCGAAA TGCGTGA
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Protein sequence | MSTTAAQAMV AATARLRAAG VEDPARDARV LLAHAARIEA ARVTLIAPEE LSHEVAERYD QLISLRAIRV PVSHLVGERD FYGRRFKVSG DVLDPRPETE TLIEAALAEP FERVLDLGVG SGCILVTLLA EQQRARGLGV DLSEAACLQA SANAVLHRVE ARADIRQSNW FSAVEGQFDL IVSNPPYIAL EEMDGLSAEV RDHEPQMALT DGADGLSAYR QICAGLAPHL AANGRVMVEI GPTQGPAVAQ MMRETGLRDV SVLPDLDGRD RVVFGRNA
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