Gene TM1040_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0942 
Symbol 
ID4077336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1004793 
End bp1005629 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID638006245 
ProductHemK family modification methylase 
Protein accessionYP_612937 
Protein GI99080783 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.452604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCGCCGCACA AGCCATGGTG GCGGCAACGG CGCGCCTAAG AGCGGCGGGG 
GTAGAGGACC CCGCGCGCGA TGCGCGGGTG CTTTTGGCGC ATGCCGCGCG GATTGAGGCG
GCGCGGGTCA CATTGATCGC GCCCGAGGAA CTCTCGCATG AGGTTGCCGA ACGCTATGAC
CAGCTGATTT CCCTGCGCGC GATCCGGGTA CCCGTGTCGC ATCTCGTGGG CGAGCGGGAT
TTCTATGGCC GCCGCTTCAA GGTCTCTGGC GATGTTCTGG ACCCGCGTCC CGAAACCGAA
ACCCTGATCG AAGCGGCGCT TGCAGAGCCG TTCGAGCGGG TGCTGGATCT TGGGGTGGGG
TCGGGCTGCA TTCTGGTGAC GCTCTTGGCA GAGCAGCAGC GCGCGCGCGG CCTTGGCGTG
GACCTCAGTG AAGCCGCCTG TCTTCAGGCC AGCGCCAATG CGGTGTTGCA CCGCGTCGAG
GCGCGTGCCG ACATCCGCCA GTCGAACTGG TTTTCCGCTG TTGAAGGGCA GTTTGACCTG
ATTGTCTCCA ACCCGCCTTA TATTGCGCTT GAAGAAATGG ATGGGCTCTC GGCAGAGGTG
CGCGATCATG AACCGCAAAT GGCGCTCACG GATGGGGCGG ATGGCCTCAG CGCGTATCGG
CAAATCTGTG CAGGGCTTGC GCCGCATCTC GCAGCAAATG GGCGCGTGAT GGTAGAAATC
GGCCCCACGC AAGGTCCGGC TGTTGCGCAG ATGATGCGCG AAACGGGGCT TCGCGATGTT
AGCGTGCTGC CGGACCTGGA TGGTCGGGAT CGGGTCGTTT TTGGCCGAAA TGCGTGA
 
Protein sequence
MSTTAAQAMV AATARLRAAG VEDPARDARV LLAHAARIEA ARVTLIAPEE LSHEVAERYD 
QLISLRAIRV PVSHLVGERD FYGRRFKVSG DVLDPRPETE TLIEAALAEP FERVLDLGVG
SGCILVTLLA EQQRARGLGV DLSEAACLQA SANAVLHRVE ARADIRQSNW FSAVEGQFDL
IVSNPPYIAL EEMDGLSAEV RDHEPQMALT DGADGLSAYR QICAGLAPHL AANGRVMVEI
GPTQGPAVAQ MMRETGLRDV SVLPDLDGRD RVVFGRNA