| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0939 |
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| Symbol | |
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| ID | 4077333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1002122 |
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| End bp | 1003069 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006242 |
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| Product | agmatinase |
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| Protein accession | YP_612934 |
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| Protein GI | 99080780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.220122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGT TCAATCAACC CATCAGCGGC AATGATCTGG CGCGGTTCTC GGGGCCGGGC
ACCTTTATGC GCCTGCCGCA GGCCACCTCG CTAGAGGGTC TGGATGTGGC GGTGCTGGGT
GTGCCGATGG ATATTGGCAC CTCCTGGCGT TCCGGGACGC GGTTCGGGCC CAAGCAGATC
CGCGCCGAGA GCGCGATGAT CCGCCCGTAC AACATGGCCA CCGGGGCTGC GCCTTTTGAT
GCGCTCAACA TTGCCGATAT TGGCGATCTG GCGATCAATA CGTTCAACCT CGCGGAGTCG
CTGCGCATCA TCGAAGACAG CTATGACGCG ATCCTCGGTT CGGGCGTGCT TCCCTTTGCG
ATGGGGGGCG ATCACTCGAT CACCCTGCCG ATCCTCAGGG CGATGGCGCG CAGGTATGGC
CCGGTTGCGG TGATCCATGT GGATGCCCAT GCGGACGTCA ATGACGAGAT GTTTGGCGAG
CGCGAAACCC ACGGCACCGT GTTCCGCCGC GCCTATGAAG AGGGGCTTCT GGAGGCGGAT
AAAGTTTATC AGATTGGTCT GCGCGGTACC GGCTATGGAC CGGATGATTT CAAAGAGCCG
CAGAGCTGGG GCTTTCAGCA TTTTGTCGCC TCCGAGCTCT GGAACCGATC GCTGCACAAT
ATGGGGGCGG AAATCCGTCG CGATATTGGC GGGCGTCCGG TCTATATCTC CTATGATATC
GACAGTCTTG ATCCCGCCTT CGCGCCGGGC ACCGGCACGC CGGAAATTGG CGGGCTGACC
ACCATGCAGG CGCTGGAGCT GATCCGCGCC TTCAAGGGGC TCAATGTCGT GGGATGTGAT
CTTGTCGAAG TCTCGCCGCC CTACGACCCT TCGGGGAATA CGGCGCTTGT AGCAGCCAAT
CTGATCTATG AGATGCTGTG CATCCTGCCA GGACGGGATA GGGCGTAA
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| Protein sequence | MSEFNQPISG NDLARFSGPG TFMRLPQATS LEGLDVAVLG VPMDIGTSWR SGTRFGPKQI
RAESAMIRPY NMATGAAPFD ALNIADIGDL AINTFNLAES LRIIEDSYDA ILGSGVLPFA
MGGDHSITLP ILRAMARRYG PVAVIHVDAH ADVNDEMFGE RETHGTVFRR AYEEGLLEAD
KVYQIGLRGT GYGPDDFKEP QSWGFQHFVA SELWNRSLHN MGAEIRRDIG GRPVYISYDI
DSLDPAFAPG TGTPEIGGLT TMQALELIRA FKGLNVVGCD LVEVSPPYDP SGNTALVAAN
LIYEMLCILP GRDRA
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