Gene TM1040_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0924 
SymbolanmK 
ID4077552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp986286 
End bp987413 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content65% 
IMG OID638006227 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_612919 
Protein GI99080765 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.922761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGAG CCATATCCAA GTCAGGCCCG GTGCGGGCCT TGGGCGCCAT GAGCGGGACA 
TCGCTTGACG GGGTCGACGT CGCAGTTCTG GAAACCGACG GGCGCGACAT TCTCGGCTTT
GGAGAGACGG GCTACCGCGC CTATTCGGAC GCGGAGCGGG AGGTGTTGCG GGCCGCGCTG
GGCCAGTGGA CCGGCGATGC AGTCGCGGCG GCGGCGCGGG TGGTCGAGGC GGCGCATATC
GAGGTGATGA CGGACCACGC CGATGTGGAT CTCATCGGTT TTCATGGCCA GACCGTTGCA
CATGCCCCGC GTCTTCAGGG CACGTTGCAG GTTGGCGATG GTGGTGTGCT GGCCGAGGCC
TTGGGGCGGC CTGTGGTCTG GGACTTTCGC TCTGATGATG TGTCGATGGG CGGCGAGGGC
GCACCGCTCG CGCCTTTCTT CCATCATGCC TGCGCGCGCT ATATCGGCGC GACAGAGCCC
TTGTGTTTTC TGAACCTCGG CGGGGTCGGC AACGTGACCT ATGTTGATCC CCGCAAGGCC
CGGCCCGAAG ACGAAGGGGC GCTTCTGGCG TTCGATACCG GGCCTGCCAA TGCGCCGATC
AACGACTTTC TTCAGTCCCG TCTCGGTCTT GCGATGGACG AAGGCGGTAG GATTGCATCC
GGGGGCGCGG TGGAAAACGG CGCGCTGGAG CTGTTTCTCG CCGAGCCCTA TTTTGCGCGG
ATGCCACCCA AATCTCTGGA TCGAAACGAT TTCCCCGAGA TGATCGGACT CGTGACCGAG
CTCAGCGATG CGGATGCCAC CGCGACACTT ACCGCCATGT GTGCTGCAGC CGTGGCGCAA
GGCATGGAGC ATTGTCCCAA GGCACCGTCA AAGGTGCTTG TCACCGGCGG TGGGCGGCAC
AATCCGGTGC TGATGGAAAT GCTGCGGGTG TCGCTTGATT GCCCGGTAGA GCCGGTGGAA
ACGGTGGGGC TCGATGGGGA CATGTTGGAA GCGCAGGCGT TTGCCTACCT CGCGGTCAGG
GTGGCGCGCG GCCTTCCGAC CTCAGCGCCC AGCACGACCG GCGTGCGCGC CTGCGTCGGC
GGCGGGACGG TGACCGTTCC CGAAGGATGG ACAGCGCGCA AAACCTGA
 
Protein sequence
MGRAISKSGP VRALGAMSGT SLDGVDVAVL ETDGRDILGF GETGYRAYSD AEREVLRAAL 
GQWTGDAVAA AARVVEAAHI EVMTDHADVD LIGFHGQTVA HAPRLQGTLQ VGDGGVLAEA
LGRPVVWDFR SDDVSMGGEG APLAPFFHHA CARYIGATEP LCFLNLGGVG NVTYVDPRKA
RPEDEGALLA FDTGPANAPI NDFLQSRLGL AMDEGGRIAS GGAVENGALE LFLAEPYFAR
MPPKSLDRND FPEMIGLVTE LSDADATATL TAMCAAAVAQ GMEHCPKAPS KVLVTGGGRH
NPVLMEMLRV SLDCPVEPVE TVGLDGDMLE AQAFAYLAVR VARGLPTSAP STTGVRACVG
GGTVTVPEGW TARKT