| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0915 |
|---|
| Symbol | |
|---|
| ID | 4076285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 977000 |
|---|
| End bp | 978127 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638006218 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsX |
|---|
| Protein accession | YP_612910 |
|---|
| Protein GI | 99080756 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTA ACACCGCTCC ATCGCAGGCA GATGCCCGCC GCACCGTGAT TTCGGTGGAC
GCCATGGGTG GCGATGCCGG CCCGGCCGTT GTGGTCGCAG GCATCGCCAA ATCCGCGAGC
AAGAACCCCG ATATCGGGTT CCTGCTGCAT GGTCCCGCTG AAGAGTTAGA ACCCCTTGTG
GCCCGCAGGA AAACCCTGAA GGGCCGCGTG GAGATTCGTG ACGCACGCGA TGTGGTCACG
ATGGAAGACA AGCCAAGCCA AGTCATGCGC AACGGCAAGG GCACCTCGAT GTGGTCGGCC
CTTGAATCCG TGCGCTCTGG CGAGGCTGAT GGCGTTGTCT CCTGCGGTAA CACCGGCGCC
TTGATGGCGC TGTCGATGCT GCGCCTGCGC AAGCTGCCCG GGGTCAATCG CCCGGCCATT
GCGATTCTCT GGCCCTCGCG TAACCCACAA GGGTTTAACG TCATGCTCGA CGTGGGCGCC
GATGTGCGCG CCGATGCAGA GGATCTGTTG CAATACGCCC TGATGGGCAC CTCCTACATC
CGAAACTCGA TGGATCTGCC CTGCCCGCGT GTGGGGCTGT TGAACGTCGG GACCGAGGAA
CACAAGGGCC GCGCGGAACT CAAGGAAGCC TACGCGCTGA TCTCTCAGAA CGCAGAGAAG
GCGAATTTCG AATTCGTCGG CTTTGTCGAG GGCAGCGACA TCCCCGGAGA CATCGCCGAT
GTGATCGTCA CCGACGGCTT TACCGGCAAT GTCGCGATCA AAACCGGCGA AGGCACCGCC
AGCCTGTTGC GCTCGGCGAT CCGCGAAGCC TTTGAATATT CTATCCTATC CCGTCTGGCG
GCCCTCTTGG CCTATACCTC GCTGTCCCGC CTTGCCAAAC GGATCGACCC GCGCCGGGTC
AATGGTGGCG TTTTCCTCGG CCTCAATGGC ACCGTTGTGA AATCTCATGG CGGCGCCGAT
GCCACGGGCG TTTCGGCTGC CGTGAAACTT GCGTTTCTTC TTGCAGAACA AGGATTTGCG
GAAAAGCTTG CAGCCCGGGT TGCATCCGCC GTAGAGCTTG CCCAAGATGA CGCAACGTCC
GCAGACGCGG ACGCACCCGG CGATTCTGAG ACCGGGAGCA CGAACTAG
|
|---|
| Protein sequence | MTGNTAPSQA DARRTVISVD AMGGDAGPAV VVAGIAKSAS KNPDIGFLLH GPAEELEPLV
ARRKTLKGRV EIRDARDVVT MEDKPSQVMR NGKGTSMWSA LESVRSGEAD GVVSCGNTGA
LMALSMLRLR KLPGVNRPAI AILWPSRNPQ GFNVMLDVGA DVRADAEDLL QYALMGTSYI
RNSMDLPCPR VGLLNVGTEE HKGRAELKEA YALISQNAEK ANFEFVGFVE GSDIPGDIAD
VIVTDGFTGN VAIKTGEGTA SLLRSAIREA FEYSILSRLA ALLAYTSLSR LAKRIDPRRV
NGGVFLGLNG TVVKSHGGAD ATGVSAAVKL AFLLAEQGFA EKLAARVASA VELAQDDATS
ADADAPGDSE TGSTN
|
|---|
| |