| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0911 |
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| Symbol | |
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| ID | 4076281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 971618 |
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| End bp | 972697 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006213 |
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| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
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| Protein accession | YP_612906 |
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| Protein GI | 99080752 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTG TTTTGCCCAG CCAGACGATC GAAACCATGC TCGCGCGTGC AGACATCAAA
ATCGACGCGC CGCTGAGCGA AGGTCAGATC CAGCCCGCAA GCCTTGACCT CCGTCTGGGC
AAGGTCGCCT ATCGCGTGCG CGCGTCATTC CTTGCGGGCC AAGGGCGCAC CGTGGCCGAG
CGCCTCGAAG AGTTTGAGAT GCACCGCATC GACCTCAGCG AAGGTGCCGT GTTGGAAAAA
GGCTGCGTCT ATGTGGTGCC GCTGATGGAA GCACTCGACC TGCCCGATAC AGTAAGCGCC
GTAGCCAATG CCAAAAGCTC CACCGGGCGG CTCGACCTGC TGACCCGGAC CATCACCGAT
GGGGGGGAGG AGTTCGACCG CATCCGCGCC GGTTACACTG GCCCGCTTTA TGCCGAGATC
TGCCCGCGCT CTTTTTCTGT GCTGGCCCGC CCCGGCATGC GGCTCAATCA GATCCGCTTT
CGCGACGGGC AATCCGTGCT GGATGACGCG GCGCTCGCGG ATCTCCACGC AAAGACCCCA
CTGGTGGATG GCGAGGCCGT GATCGAGGAT GGGCTTGGCT TTTCTGTCGA TCTGCGCCTG
CCCGGCACCG ATCTGGTGGG CTACCGCGCC AAACCGCACA CCGGCGTGAT CGACCTCGAC
CGGATCTCCG CTTATGATCC TCGCGACTAT TGGGAGGAAG TGCGCAGCGA CAAGGGCCGG
ATCATCCTTG ATCCGGGTGC GTTCTACATC CTCGTGAGCC GCGAGGCGGT GCATATCCCG
CCCGAATACG CGGCTGAGAT GGCGCCCTAC CTTGCAATGG TGGGCGAGTT TCGCGTGCAT
TACGCGGGCT TTTTTGATCC CGGTTTTGGC CATGCCGCGG CCGGTGGGGC TGGCTCTCGC
GGCGTGCTGG AGGTGCGCTG TCACGAGGCG CCTTTTGTGC TCGAACACGG GCAGGTGGTG
GGCCGTCTGG TCTATGAGCG CATGGCCGAG CTGCCAGAGC AGCTCTATGG CGCGGGGATT
GCCTCAAACT ATCAGGGCCA GGGGCTGAAA CTCTCGAAAC ATTTCCGCAG CCCCAGCTGA
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| Protein sequence | MTGVLPSQTI ETMLARADIK IDAPLSEGQI QPASLDLRLG KVAYRVRASF LAGQGRTVAE
RLEEFEMHRI DLSEGAVLEK GCVYVVPLME ALDLPDTVSA VANAKSSTGR LDLLTRTITD
GGEEFDRIRA GYTGPLYAEI CPRSFSVLAR PGMRLNQIRF RDGQSVLDDA ALADLHAKTP
LVDGEAVIED GLGFSVDLRL PGTDLVGYRA KPHTGVIDLD RISAYDPRDY WEEVRSDKGR
IILDPGAFYI LVSREAVHIP PEYAAEMAPY LAMVGEFRVH YAGFFDPGFG HAAAGGAGSR
GVLEVRCHEA PFVLEHGQVV GRLVYERMAE LPEQLYGAGI ASNYQGQGLK LSKHFRSPS
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