Gene TM1040_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0892 
Symbol 
ID4075989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp953229 
End bp953396 
Gene Length168 bp 
Protein Length55 aa 
Translation table11 
GC content57% 
IMG OID638006194 
Producthypothetical protein 
Protein accessionYP_612887 
Protein GI99080733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.151316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA TCCTCGCCCT GCTCGTTGGT GCTGCCCTTG GCGCCTATAA GGCCCGTAAA 
CGTGGCGGCA ATCTTGCCGA TATGCTGCAA TACGGGGCTG TCTACGGCAT GATCTTTGGT
ATTCTCGGCC TGTTCGCCAC CATCGTCACC CACCGCATGA TGATCTGA
 
Protein sequence
MIVILALLVG AALGAYKARK RGGNLADMLQ YGAVYGMIFG ILGLFATIVT HRMMI