| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0889 |
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| Symbol | |
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| ID | 4075986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 949911 |
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| End bp | 950897 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638006191 |
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| Product | luciferase-like |
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| Protein accession | YP_612884 |
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| Protein GI | 99080730 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.761673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.656027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATT CCGTCCTCGA TCTCGCCCCG GTGCCAGAAG GCGCCACCAC TGCAGAGGCG
CTCGCCAATA GCGCCGACCT CGCCCGACAC GCCGAACGCT GGGGCTATCA CCGCTACTGG
CTGGCGGAGC ATCACAACAT GCCCGGCATT GCGAGCGCGG CAACGGCGGT GATGATCGGC
CATATTGCAC AGGCAACCTC GACCATCCGG GTTGGCGCGG GCGGCATCAT GCTGCCCAAT
CACGCGCCCT ACATGGTGGC CGAAGCCTTT GGTACCCTTG TAGAAATTCA CGGCGACCGG
ATCGACCTCG GCGTTGGGCG CGCACCGGGC ACGGATATGG CGGCGATGCG GGCGATGCGG
CGCGGGTTGC AGGACTCCGG CGATCGCTTC CCCGAGGACG TGCAGGAGCT CATCTCCCAT
CTCGGCCCCC GCCGCACAGA GAGCAATCTG CGCGCCATCC CCGGTGAGGG CACCGAGGTT
CCAGTCTGGA TGCTGGGGTC GAGCCTTTAC GGGGCACAGC TCGCCGCCAT GCTGGGGCTG
CCTTATGCCT TTGCCTCGCA TTTTGCGCCC CAAGCGCTCT CGCAGGCCTT TGAGGTCTAT
CGCCGCCAGT TTCGCCCCTC AAAGACGCTA CAAAAGCCGC ATGCGATGCT GGCGGTCAAC
GTCTTTGCCG CCGCCACGGA TGCAGAGGGC ATCCGGCTGC GCACCACCAT GCAGCAAGCC
TTTGCCCGGT TGCGCCTTGG CACCCCGGGC AAGCTGCCTG CCCCGGTAGA GAATATCGCA
GATGTGCTGA CGCCGGACAT TCTTGCCGGG GTCAATCAGG CGCTGACGAT TTCGGCGGTT
GGCGCAAAGG ACAGTGTGCG CGAAGATCTG GCACGGCTCA TTGAGACCTA CCAGCCCGAC
GAGGTGATCC TGACCGGGCA GATCCATGAC CATGACGCGC GGCTGCGCTC GTTTGAGATC
GCGGCAGAGA TCCTGGGGAA CAGCTAG
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| Protein sequence | MRYSVLDLAP VPEGATTAEA LANSADLARH AERWGYHRYW LAEHHNMPGI ASAATAVMIG
HIAQATSTIR VGAGGIMLPN HAPYMVAEAF GTLVEIHGDR IDLGVGRAPG TDMAAMRAMR
RGLQDSGDRF PEDVQELISH LGPRRTESNL RAIPGEGTEV PVWMLGSSLY GAQLAAMLGL
PYAFASHFAP QALSQAFEVY RRQFRPSKTL QKPHAMLAVN VFAAATDAEG IRLRTTMQQA
FARLRLGTPG KLPAPVENIA DVLTPDILAG VNQALTISAV GAKDSVREDL ARLIETYQPD
EVILTGQIHD HDARLRSFEI AAEILGNS
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