Gene TM1040_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0882 
Symbol 
ID4075979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp941881 
End bp942705 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content61% 
IMG OID638006184 
Productarginyl-tRNA-protein transferase 
Protein accessionYP_612877 
Protein GI99080723 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2935] Putative arginyl-tRNA:protein arginylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.883111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.212402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACA CTCTACCGAT CGCTCCTCAG TTCTATGTGA CTGCGCCGCA GCCCTGCCCC 
TACCTTGAGG GCCGGATGGA GCGCAAACTG TTCACCTCGC TGCAGGGCGA CGGTGTGGAG
CAGCTGAACA ACTCGCTCAG CCAGCAGGGC TTTCGGCGCT CGCAGAATGT GCTCTACCGT
CCTTCCTGTT CCGACTGCTC GGCCTGCATG TCCGCACGCA TCAGCGTTGC CGACTTCAAA
CCGACCCGCA GCCAGCGCAA GACGCTCAAT CGCAACCGCC ACCTGGACCG GCGCGCCACC
TCGCCCTGGG CGACCGAGGA TCAATACGCG CTGTTTCGAG ACTATCTCGA CCAGCGCCAC
GCCGACGGTG GCATGGCGGA CATGGATGTC TTTGAATATG CCGCCATGGT CGAGGAAACC
CCGATCCGGA CGCGGGTGGT GGAATACACC GACTTGGACA CCAATGCGCT CACCGCTGTT
TCACTCACCG ATGTGCTCGA AGACGGGCTG AGCATGGTCT ATTCCTTCTA TGCGCCCAAC
CTGCCGCAGA ACTCGCTCGG CACCTTCATG GTGCTTGATC ACATCGAGAT CGCGCGCGAG
GCCGGGCTGC CCTATGTTTA CCTGGGCTAC TGGGTCCCTG GCAGTCAGAA GATGGGGTAC
AAGGCCAAGT TCTCCGGCCT TGAAGTCTAT TTCGGCGGCG AATGGACTCC CTTGAAGGAC
CCCGAAAGCT TTACCGCCGA GGATCACCCT CTCTCTACCG CGCCGGTGGC CGAGCAGGTG
GCCAATATCC AGCTGCCGCA GGGTACCTCC CCCAAAAAAA GGTAA
 
Protein sequence
MRHTLPIAPQ FYVTAPQPCP YLEGRMERKL FTSLQGDGVE QLNNSLSQQG FRRSQNVLYR 
PSCSDCSACM SARISVADFK PTRSQRKTLN RNRHLDRRAT SPWATEDQYA LFRDYLDQRH
ADGGMADMDV FEYAAMVEET PIRTRVVEYT DLDTNALTAV SLTDVLEDGL SMVYSFYAPN
LPQNSLGTFM VLDHIEIARE AGLPYVYLGY WVPGSQKMGY KAKFSGLEVY FGGEWTPLKD
PESFTAEDHP LSTAPVAEQV ANIQLPQGTS PKKR