| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0878 |
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| Symbol | |
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| ID | 4076248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 936737 |
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| End bp | 937822 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006180 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_612873 |
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| Protein GI | 99080719 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.228137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCGCA GATCCTTTCT GAAAACATCC GCAATCGGTG GCTCCGCAGC CGCCGCATCC
GCAGCTCTCG CCGCACCGGC CTACGCACAG GGCAATCGCA CCCTGACCAT GGTCACCACC
TGGGGCCGTG GCCTTGCTGG TGTGCATGAC TCCGCGCAGC GCGTGGCAGA CAGCATCACC
GCCATGACCG ACGGCGCTCT GACCGTTGAC CTCAAAGCCG CTGGCGAACT CGTTGGCGCG
TTCGAGGTGT TTGACGCCGT GACCGCGGGT CAGGCCGACA TGTACCACGG TGCCGACTAT
TACTTCGTGG GTCAGCACCC GGGCTATGCG TTCTTCACCG CCGTGCCTTT CGGCATGACC
GCGCAGGAAC TGGCCAACTG GTACTACCAG GACGGCGGCA TGGAGCTCCA CGACGAGCTG
GGTCAGATCT TTGGTCTGAA GTCCTTCCTC GGCGGCAACA CCGGCGCGCA GGCCGGTGGC
TGGTTCTCCA AGGAGATCAA CAGCCCCGAC GACTTCAACG GTCTGAAGTT CCGTATGCCG
GGTCTCGGCG GTAAAGCTCT GGGTAAACTG GGCGCATCCG TTCAGAACAT CCCCGGCTCC
GAAGTGTATC AGGCGCTCTC CTCCGGTGCG ATCGACGGCA CCGAGTGGAT CGGCCCCTGG
GCAGACGAGA AAGCGGGCTT CCAGGAAATC ACCAAGACCT ACTACACCGC TGGCTTCCAC
GAGCCGGGTG CGGGTCTCTC CGTTGCGACC AACCGCGACG TGTTCGAGAG CCTCACACCG
GGTCAGCAGA AGGTGATCGA GATCGCCTCT GCCGAAGCAC ACCAGTGGAA CCTGAGCCAG
TTCCTCGCCA ACAACGGTGC AGCGCTGCAG CGTCTGCAGG CCGGTGGCGT GAAGGTCATG
GAATTCCCCG ACTCCGTCTG GGATGCCTTC GGCAAGGCCT CCATGGAAGT GCACCAGGAA
AACATGGGCG ACGATCTCTA CAAGAAGATC TACGACAGCG CCATGGCCTC CATGAAAGCC
TCCTCCGGCT GGATCAACCA GTCCTCCGGC ACCTATGTGG CACAGCGCGA CCGCGTTCTG
GGCTAA
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| Protein sequence | MDRRSFLKTS AIGGSAAAAS AALAAPAYAQ GNRTLTMVTT WGRGLAGVHD SAQRVADSIT
AMTDGALTVD LKAAGELVGA FEVFDAVTAG QADMYHGADY YFVGQHPGYA FFTAVPFGMT
AQELANWYYQ DGGMELHDEL GQIFGLKSFL GGNTGAQAGG WFSKEINSPD DFNGLKFRMP
GLGGKALGKL GASVQNIPGS EVYQALSSGA IDGTEWIGPW ADEKAGFQEI TKTYYTAGFH
EPGAGLSVAT NRDVFESLTP GQQKVIEIAS AEAHQWNLSQ FLANNGAALQ RLQAGGVKVM
EFPDSVWDAF GKASMEVHQE NMGDDLYKKI YDSAMASMKA SSGWINQSSG TYVAQRDRVL
G
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