| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0877 |
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| Symbol | |
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| ID | 4076247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 935016 |
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| End bp | 936440 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006179 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_612872 |
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| Protein GI | 99080718 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.858486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.37178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC GCATGTTCCG CCCGAATTAC GCCCAAAAAC TGTCCCTGCT GGCCACTTTG
CCCTTAATCG TGGCCTGCCT GTGCATCGCG ACCCTGGTGG CCTATCAATC CCGCGCCATG
GCTGAACGCG AAATTCAGGT GCTGGAGCGT CAGTTGATCG AGGCCAAGAA GGCCGAACTG
CGCAACTACG TCACCCAGGC CCGCAACGGC TTTATGCATA TTTATGGCCC CGCCGCCCCG
GACGACACCG AGGCCAAGCG CAAGGTCACC CAGATCCTGA GCGCCATGAT CTACGGCCAG
GACGGGTTCT TTTTTGTCTA TGATTACGAT GGCACCAACC TGGTCAGCCC GCGTCAGACC
GAGTTTATCA ACCGCAACTG GGCGGGACTG ACGGATGCCA ATGGCGTGCC GGTGGTCAAC
ACTTTCATCG ACATCGCGCG TCAGGGTGCC GGCTGGCACA GTTTCATGTG GGAAAAGCCC
TCCACCGGTG AAGAGGCGCA GATGATCGCC TATGTGGTCG GGCTTCAAGA CTGGCAATGG
GCAGTGGGCA CCGGGGTTTT TATCGACGAT GTGATCGCCT CGATTGCCAG CTCGCGTCAG
GAGGTCGAAA ACCGGGTGCG TCGCACATTC CTCTATATAG GTGCGATTAC CCTTGTGGCG
TTGATCGCGG TGTTTGGCTC TGGGATGCTC CTCAACATCC GCGAGCGGCG TCTGGCCGAC
GCCAAGCTCA AGGAGCTCAC GCAGCGGGTC TTTGATGCCC AGGAAGAAGA GCGCGGGCGG
GTGGCGCGCG AGCTCCATGA TTCGATCAGC CAGTTGCTGG TCGGGGTACG CTATGCGCTG
GAAACCGTCA GGCGGCGCAT CGGGCGGGGC GAGTTCGAGA CCACCGCCGC GCCGCTCGAC
AAGGGCGTCG AAGGTCTGGC GACCGCCATC ACCGAAGTAC GCCGCATCAG CCGTGATCTG
CGCCCCGGCG TGCTGGATGA TCTCGGGCTT GGCCCCGCGC TCAAGGCGCT GACGGATGAC
TTTGCAGCCC GCACCGGGAT CGAAACGGAT TTCACTACTG TGGTCTTTCG CAACCGCCTC
GATCAGGAGG CCAAGATTGC GCTTTACCGG ATTGCCCAGG AGGCGCTCAC CAATATCGAA
CGCCATTCGG GTGCCACGCG GGTGACGATG GATCTGCGCG GCCATGAAAA CGGCGCCACC
ATGCGCATCT CAGACAATGG CTCTGGCCTG CCCACCGAAG AGGAGCGCAG CCGCTCCGGG
ATTGGACTGC GCAACATGCA AGAGCGTATG GAACAGCTTG ACGGCACCCT GCGCATTCTG
TCATTTCGCG CAGGCCGCGA CCGTGGCACA GTCATCATCG CCAGCCTGCC CCTGAGCCAC
CTGCTCCCGC CGGGCGACGA GCTTGCAGCG CATCGCCTGC CCTGA
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| Protein sequence | MIRRMFRPNY AQKLSLLATL PLIVACLCIA TLVAYQSRAM AEREIQVLER QLIEAKKAEL
RNYVTQARNG FMHIYGPAAP DDTEAKRKVT QILSAMIYGQ DGFFFVYDYD GTNLVSPRQT
EFINRNWAGL TDANGVPVVN TFIDIARQGA GWHSFMWEKP STGEEAQMIA YVVGLQDWQW
AVGTGVFIDD VIASIASSRQ EVENRVRRTF LYIGAITLVA LIAVFGSGML LNIRERRLAD
AKLKELTQRV FDAQEEERGR VARELHDSIS QLLVGVRYAL ETVRRRIGRG EFETTAAPLD
KGVEGLATAI TEVRRISRDL RPGVLDDLGL GPALKALTDD FAARTGIETD FTTVVFRNRL
DQEAKIALYR IAQEALTNIE RHSGATRVTM DLRGHENGAT MRISDNGSGL PTEEERSRSG
IGLRNMQERM EQLDGTLRIL SFRAGRDRGT VIIASLPLSH LLPPGDELAA HRLP
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