| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0872 |
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| Symbol | |
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| ID | 4076242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 929716 |
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| End bp | 930516 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006174 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_612867 |
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| Protein GI | 99080713 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.336664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAC GCTCCAGATC GCCTGCTGAA TTAAGAACAG TGTTCGGAGA CAATCTGCGC
AAACTTGCCA AAGACTACCC CTCCATTTCC GAGCTGTCGC GGCGCCTTGG CATCAACCGC
ACCCAGTTCA ACCGCTACCT GTCGGGAGAG AGCTTCCCGC GCCCCGACGT GCTTGACCGG
ATTTGTGGCT TCTTTGACGT GGATGCGCGT ATCCTGCTGG AGCCGGTCGA AAGCCTTGAC
CGTCCCGATG GCAGCCCCCT GCAGAGCGAT TACCTTCGGG ATTTTATCGA CGCGGGTCTG
ATGCGCGTCA CCGAAAAGGT CTTTCCTAGC GGCTTCTATC GCTTCACGCG GCGCAGTTTT
ATCAGCGATG AAAGCTATGT GCTGGGGATC GTTCACGTCA AACGCATCGA CGGTGTCACC
TATGTGCGCG GCTATGAACC CCGCGCGGGT ATGCGATACC AGGGGCTGTC CACGGATGGC
CCCTCACGCG AATACCGTGG TTACATGACC TGTCACGAGG ACGGCGTGGC CTTTGTACTC
AGTCGGCGCA ATACGCTGAC CTATTCTTTC AATTACCTCG CCCGGGTGTC TGCGGCTGAA
AACAGTCTCT GGACCGGCTA TGTGACCCGC ACGATCCGTG AGAGCGAGAG CGGGGATCGC
GCCCTGCGTA TGATCTATGA GTACCTCGGG ACCGATGTAA GCGCGGCGAT CAAGGCCGCA
AGAGGCTGCG GTTTCACCAC CGCACCCGAG ATCATCCCCT TTCACCGGCG GCTTCTGCAG
CTCGGCAAAC CCTTCAGGTA G
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| Protein sequence | MLKRSRSPAE LRTVFGDNLR KLAKDYPSIS ELSRRLGINR TQFNRYLSGE SFPRPDVLDR
ICGFFDVDAR ILLEPVESLD RPDGSPLQSD YLRDFIDAGL MRVTEKVFPS GFYRFTRRSF
ISDESYVLGI VHVKRIDGVT YVRGYEPRAG MRYQGLSTDG PSREYRGYMT CHEDGVAFVL
SRRNTLTYSF NYLARVSAAE NSLWTGYVTR TIRESESGDR ALRMIYEYLG TDVSAAIKAA
RGCGFTTAPE IIPFHRRLLQ LGKPFR
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