| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0868 |
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| Symbol | prfB |
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| ID | 4076238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 924764 |
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| End bp | 925888 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006170 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_612863 |
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| Protein GI | 99080709 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.395021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCG AGATCCAGAC CATCGTGGCC GATATCGAAA AATCGCTCGA CCTGCTTGCC
CAGCGGATGA ACTGGGAGAC GGCGGAATTC CGGCTTGAGG AATTCAACGC GCGGGTCGAA
GATCCCAACC TCTGGGATGA CCCTGCAGCG GCGCAAAAGC TGATGCGGGA CCGTCAGTCC
CTCGTGGACG CAATGGACAC CTACAAGAGC ATCCGCCAGG ACCTTCAGGA CAGCGTTGAG
CTGATCGAGC TTGGCGAGAT GGAAGAGGAT GCCGAAGTCG TCAAAGACGC CGAAGACACC
CTTAAGGCAC TGAAGGAAAA AGCCGCCCAG AAAGAGCTTG AAGCGCTTCT GGACGGTGAA
ACCGACCCCA ATGACGCCTT CCTCGAGATC AAGGCGGGCG CGGGCGGCAC CGAGGCCTGC
GACTGGGCGT CGATGTTGGC GCGCATGTAT GTGCGCTGGG CCGAGAGCCG AGGCTTCAGC
GTCGAGCTGC AGGAAGAGCA GGCGGGCGCC GAGGCCGGCA TTAAATCCGC CACCTATCAG
ATCAAGGGTC ACAACGCCTA TGGCTGGCTG AAGTCCGAGA GCGGCACCCA CCGTCTTGTG
CGGATTTCGC CCTTTGGCAA AGGCACGCGC GAGACGTCAT TTGCCGCCGT GGGCGCCTAT
CCGGTGATCG ATGACAACAT CGAAATTGAG GTCAACCCGG CCGATATCCG CATCGACACC
TACCGTTCGT CAGGCGCGGG CGGTCAGCAC GTCAACACCA CCGACTCGGC GGTGCGGATC
ACTCACGAAC CCACGGGCAT TGTAGTGACC TCCTCGGAGA AATCGCAGCA CCAGAACCGC
GACATCGCCA TGAAGGCGCT GAAATCGCGG CTCTACCAGC TCGAACTTGA TCGCCGCAAC
GCCGAAGTAA ACGCGCTGCA CGAGGCAAAG GGCGATGCGG GGTGGGGTAA CCAGATCCGA
TCCTATGTGA TGCAGCCCTA CCAGATGGTC AAAGACCTGC GCACCAACCA TGAGACCGCC
GACACCAAAG GCGTGCTGGA TGGCGACCTT GATGGGTTCA TGGCGGCGAC GCTGGCGATG
AAGGTTGCCG GCAAAAGCCG CGCCGACGCG CAGGGCGAGG ATTAA
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| Protein sequence | MRAEIQTIVA DIEKSLDLLA QRMNWETAEF RLEEFNARVE DPNLWDDPAA AQKLMRDRQS
LVDAMDTYKS IRQDLQDSVE LIELGEMEED AEVVKDAEDT LKALKEKAAQ KELEALLDGE
TDPNDAFLEI KAGAGGTEAC DWASMLARMY VRWAESRGFS VELQEEQAGA EAGIKSATYQ
IKGHNAYGWL KSESGTHRLV RISPFGKGTR ETSFAAVGAY PVIDDNIEIE VNPADIRIDT
YRSSGAGGQH VNTTDSAVRI THEPTGIVVT SSEKSQHQNR DIAMKALKSR LYQLELDRRN
AEVNALHEAK GDAGWGNQIR SYVMQPYQMV KDLRTNHETA DTKGVLDGDL DGFMAATLAM
KVAGKSRADA QGED
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