| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0866 |
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| Symbol | |
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| ID | 4076236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 920518 |
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| End bp | 921756 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006168 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_612861 |
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| Protein GI | 99080707 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.139466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC TTTTTGCAAA GCTCTGGCTG TGCCTTACGC TGGTCCATCT GGCGTTGCTG
CCTGCTGCCG CCGCGGCGCA GGGGTTTTCG GCGCTCGCGC GGGTTTTGCC CGAAGACAGC
AGCCTTTGGG ACACTGGCGC AGGCGTGGAG CTCGAGCTGG GTCTGAGCCA GGGCGTGCCC
TACCGGATCT TTGCGCTCGA TGATCCCTAT CGTCTGGTGC TCGACTTTCA GGAGGTGGAC
TGGACCGGGC TTCAGGCCGA GGATTTTGAC CGCTCCGAGC TGATCGAACG GACACGTTTT
GGGGGCTATG TGCCGGGGTG GTCGCGGATG GTTCTCACCC TCACAGAGCC GATGCAATTG
CGCACCGCAG CGATGGACAT TGACCCTGAG ACCAGCGCGG CGAAGCTGAA ACTTGCCCTT
GCCCCCATTG ATGCCGAGAC ATTTGCGGCG ACTGCTGGGG CGCCCTACGA TCCGCGTCTT
GATCTTCCGA TGCCGGCCGA GCTCAAGCCG CGTGCCCCGC GCGATGACGA TGCGCCGCTT
GTTGTGATGA TCGACCCCGG GCATGGCGGG CTCGACCCCG GAGCCGAGGC CGAAGGCGGG
ATCGCCGAAA AGGACCTGAT GCTGGCCTTT GCCTACGATC TCGGCGAACG GCTGGTGCGC
TCAGGGGCCT TTGAGGTGCT ACTGACGCGA GAGGGAGACT ACTTTGTCTC TCTCGAGCGC
CGCATTGCCA TGGCGCATCA GCAGGGGGCT GATGTGTTCA TTTCGCTTCA TGCCGACGCG
GTCACAGAAG GCATGGCCCA TGGCACCGTG GTCTACACAC TGTCTGAATC TGCCTCTGAT
GTGGCCTCGG CCAAGCTCGC CGAACGTCAC GACCGGGCCG ACCTGCTGTC TGGCAGTGAC
CTCAGCGCTG CTGATGATGT GGTTACGGAT GTGATGCTGG ATCTCGCCCG GCAGGAGACC
CACCCGCGCA GCACTGCTTT GGCGCGCTCG GTGATCGAGG CGCTCATGGA GGCGGGAGGG
CCGGTCAATC GCCGCCCGCT GCGCTCGGCG GGGTTTTCGG TGCTGAAATC CGCTGACATC
CCGTCGATCC TGATCGAGCT GGGCTTCATG TCGAGCCCAA GGGATCTTGA GCTGCTCACG
GATCCCGACT GGCAGGCCAA AACCGCGCAA AGCATCCTGA ACGGGCTGCT GGTTTGGCGG
GAAGAGGACG CCGCGCGGCG CGCATTGGTG CGCCAATAG
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| Protein sequence | MRALFAKLWL CLTLVHLALL PAAAAAQGFS ALARVLPEDS SLWDTGAGVE LELGLSQGVP
YRIFALDDPY RLVLDFQEVD WTGLQAEDFD RSELIERTRF GGYVPGWSRM VLTLTEPMQL
RTAAMDIDPE TSAAKLKLAL APIDAETFAA TAGAPYDPRL DLPMPAELKP RAPRDDDAPL
VVMIDPGHGG LDPGAEAEGG IAEKDLMLAF AYDLGERLVR SGAFEVLLTR EGDYFVSLER
RIAMAHQQGA DVFISLHADA VTEGMAHGTV VYTLSESASD VASAKLAERH DRADLLSGSD
LSAADDVVTD VMLDLARQET HPRSTALARS VIEALMEAGG PVNRRPLRSA GFSVLKSADI
PSILIELGFM SSPRDLELLT DPDWQAKTAQ SILNGLLVWR EEDAARRALV RQ
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