| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0860 |
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| Symbol | |
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| ID | 4076035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 913262 |
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| End bp | 914491 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006162 |
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| Product | 5-aminolevulinate synthase |
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| Protein accession | YP_612855 |
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| Protein GI | 161899030 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR01821] 5-aminolevulinic acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.63511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG ACTATACCGC ACAACTCGAC GCAGCGATTG AACGCCTTCA CGAAGAAGGC
CGCTACCGGA CGTTCATTGA TATCGAGCGT CGCCGGGGGC AGTTTCCGCA TGCGGTCTGG
ACCCGTCCCG ATGGCAGCGA ACAGGACATC ACCGTCTGGT GCGGCAACGA CTATCTCGGC
ATGGGGCAGC ACCCGGTTGT GCTGAAGGCG ATGCGCGATG CAATTGATGC CACTGGTGCG
GGCTCTGGCG GGACGCGCAA TATCTCCGGC ACCACTGTCT ATCACAAAGA ACTCGAGAGC
GAGCTTGCCG ATCTGCACGG CAAGGAAGCG GCGCTTTTGT TCACCTCCGC CTACATTGCC
AACGATGCCA CGCTGTCGAC CCTGCCGAAA CTGCTGCCGG GTCTCATTAT CTATTCCGAC
GCTTTGAACC ACGCGTCCAT GATCGAGGGT GTGCGCCGAA ATGGCGGGGC CAAGCGAGTC
TTTCGCCATA ATGATGTCGC CCACCTGCGC GAACTCCTCG AGGCTGACGA TCCCGCCGCG
CCCAAGCTCA TCGCATTTGA GAGCGTCTAC TCGATGGATG GCGACTTTGG CCCGATTGCG
GAAATCTGCG ATCTCGCCGA TGAATTCAAC GCGCTGACCT ATATCGACGA AGTCCACGCC
GTCGGCATGT ATGGCCCTCG CGGCGGTGGC GTCACAGAGC GTGACAACCT CGCCCATCGT
ATCGACATCA TCAACGGCAC GCTCGCCAAG GCCTATGGCG TCATGGGCGG CTATATCGCC
GCCTCTGCCA AGATGTGCGA TGCGATCCGG TCCTATGCGC CGGGCTTTAT CTTCACCACC
TCGCTTGCGC CTTCGATTGC GGCCGGGGCC GCGGCCTCCG TGCGTCATCT CAAGACAGCG
CAGGACCTGC GCGATAAGCA TCAGGAGCAG GCGCGCTATC TCAAAACCCG CCTCAAGATG
ATGGGACTGC CCGTGATCGA TCACGGCAGC CACATCGTTC CGGTGATCGT TGGCGATCCG
GTTCATACCA AGAAACTGTC GGATATGTTG CTCTCGGACT TTGGTATCTA TGTGCAGCCG
ATCAACTTCC CGACCGTGCC GCGTGGTACA GAGCGCCTAC GATTCACGCC ATCGCCAGTG
CATGGGCCCA GCGAAATGGA CCATTTGATC CGCGCAATGG ATAAGCTTTG GTCGCATTGT
GCGCTGAATC GCGCCGAATT GGCCGGATAA
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| Protein sequence | MTVDYTAQLD AAIERLHEEG RYRTFIDIER RRGQFPHAVW TRPDGSEQDI TVWCGNDYLG
MGQHPVVLKA MRDAIDATGA GSGGTRNISG TTVYHKELES ELADLHGKEA ALLFTSAYIA
NDATLSTLPK LLPGLIIYSD ALNHASMIEG VRRNGGAKRV FRHNDVAHLR ELLEADDPAA
PKLIAFESVY SMDGDFGPIA EICDLADEFN ALTYIDEVHA VGMYGPRGGG VTERDNLAHR
IDIINGTLAK AYGVMGGYIA ASAKMCDAIR SYAPGFIFTT SLAPSIAAGA AASVRHLKTA
QDLRDKHQEQ ARYLKTRLKM MGLPVIDHGS HIVPVIVGDP VHTKKLSDML LSDFGIYVQP
INFPTVPRGT ERLRFTPSPV HGPSEMDHLI RAMDKLWSHC ALNRAELAG
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