| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0846 |
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| Symbol | |
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| ID | 4076021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 897499 |
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| End bp | 898674 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006144 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_612841 |
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| Protein GI | 99080687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.122674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CTTATTCCAC GTCCGGCGCA ATGCCGGTGA CACATGCGCG CGGTGCCGAC
GACACTGGCC CGCGCATCAG CAAGATCGAA ACCTTCTGCA CGCCGCTCAT TGGCTTTGTG
CGGGTGACTG CGGAGGATGG CAGCCAAGGC TGGGGGCAGG TCTCCACCTA CAACAGCGAT
CTGACCTCGG AGATCCTGCA TCGGCAGGTC GCGCCCTGGG CACTCGGGCG GGGTATGGAT
GCGCTGGAAG AGGTGATTGC CGAAATTCCC CTGCGCGAAC ATAAATTCCC CGGCACCTAT
CTGCGCCGCG CCATGGCCGG TCTCGACACC GCCGTGTGGG ACTGGCGCGG CAAAGCTCAG
GGCAAGCCGG TGGCAGAGCT TTTGGGTGGG TCTGCAGGGC CGGTCCGGGC GTATGCCTCC
TCCATGCGCC GCGACATCAC CCCAGAGGCC GAGGCCGAGC GTATGCAGAG GCTGCGCGAC
GCGCATGGGT TTGACGCCTT CAAAGTCCGT GTAGGGGCTG AATGCGGTCA GGACCGTGAC
GAATGGGAGG GTCGCACCGA GGCGATCATT CCCGCCATGT GCAAGGCGAT GGGAGCGCAA
GCTGCCTTGC TGGTCGACGG CAATTCTGGC TTCAGCCCCG CCCGCGCGAT CGAGGTCGGC
AGAATGCTGG AGGCCAACGG ATACGAGCAT TTTGAAGAAC CCTGTCCCTA TTGGGAGCAG
GAGCAGACCC GCGAGGTCAC CCAAGCGCTT GGGATCGATG TGGCGGGGGG CGAGCAGGAC
TGCGATCTGC AGCACTGGAA GCGTATGATC GAGAACCGTG TGGTCGACAT CATCCAACCG
GATATCCTCT ATCTCGGCGG GATGGTGCGC AGCATGGAAG TGGCCCGCAT GGGCCATGCG
GCAGGGCTGC CCTGTACGCC CCATGCGGCG AATCTTTCGC TGGTGACGCT CTTCACCATG
CACCTGATGC GTGCGCTGCC CAATCCCGGT CGCTATCTGG AGTTCTCCAT CGAAGGCGAC
GACTACTATC CCTGGCAGCG CACCTTGTTC GCAAATGATC CCTTTCAGAT CACCAATGGC
CAGGCGCTTG TCACCGACGC CCCCGGTTGG GGCGTGGAGA TTTGCCCCGA GTGGCTGGCC
AAATCCACCT ACAAATGCAG CGAGGACGAC CAATGA
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| Protein sequence | MSTPYSTSGA MPVTHARGAD DTGPRISKIE TFCTPLIGFV RVTAEDGSQG WGQVSTYNSD
LTSEILHRQV APWALGRGMD ALEEVIAEIP LREHKFPGTY LRRAMAGLDT AVWDWRGKAQ
GKPVAELLGG SAGPVRAYAS SMRRDITPEA EAERMQRLRD AHGFDAFKVR VGAECGQDRD
EWEGRTEAII PAMCKAMGAQ AALLVDGNSG FSPARAIEVG RMLEANGYEH FEEPCPYWEQ
EQTREVTQAL GIDVAGGEQD CDLQHWKRMI ENRVVDIIQP DILYLGGMVR SMEVARMGHA
AGLPCTPHAA NLSLVTLFTM HLMRALPNPG RYLEFSIEGD DYYPWQRTLF ANDPFQITNG
QALVTDAPGW GVEICPEWLA KSTYKCSEDD Q
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