| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0837 |
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| Symbol | |
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| ID | 4077543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 881647 |
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| End bp | 882579 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006135 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612832 |
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| Protein GI | 99080678 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATC CCGCTCTCAC TGCCCCGCCC CACCCCGATC CGCGCGCCCG GCGCGAGCGG
CGCAGCCGGT GGTTGCTGCT CACACCTGCA CTTGTAATCC TCAGCCTTGC CGCAAGTGGG
CCATTGCTGG TGGTGGTGAT CTACTCATTC CTCACCCCCG GTGATTACGG CGGTGTTGAA
TGGCGCTTTA CGTTGGAGCC CTGGTTCAAC GTGGTGGCCG AGCGGGACTT TTTCACCGAA
GAGCTGCAAC TGGCGGACGC GCATCTTCTG GTGTTCTGGC GCTCTATCAA GCTCTCGCTG
ATGACGGCGT TTCTCTGTCT GATCGTGGGC TTTCCCACCG CCTATTTCAT CGCCACGCGC
CCTCAGCACC GCCGGGACAT GTGGATGCTG CTGATCATGA TCCCTTTCTG GACCAATCTG
TTGATCCGAA CCTTTGCGAT CATGGAGCTC ATTCGCAACC AAGGCACCAT CAACACGCTG
TTGATGGCCA GCGGGCTCAT TGATGAGCCG ATCCAGATGC TGTTCACAGA GTTTTCGGTT
CTGATCGGGA TGACCTATGT CTATCTGCCG CTGATGATCC TGCCCATCTA TGCCTCGATG
GAGCGGCTCG GTTTCGATTT GGTGGAGGCG GGCTATGACC TCTATGCCAG CCGACTGGAC
GTACTGCGGC GCATCATCTT CCCCTTGGTG AAACCTGGCG TTGTGGCTGG CTCCATTCTT
GTCTTTGTGC CCTGCCTTGG CGCCTATGTC ACCCCACGCG TGCTGGGCGG CGGCAAGCAG
CTGATGCTGG GCAACCTCAT TGAGCTGCAG TTTGGGCAGT TGCGCAACTG GCCCCTTGGC
GCCGCGCTGG CGCTGACGCT TTTGGCGGTG GTGATGGTGG CGCTGGTGTT CTACGTGCGC
GCCATCGGGC GGGAGGGCGA AAGCGATGTC TAA
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| Protein sequence | MQDPALTAPP HPDPRARRER RSRWLLLTPA LVILSLAASG PLLVVVIYSF LTPGDYGGVE
WRFTLEPWFN VVAERDFFTE ELQLADAHLL VFWRSIKLSL MTAFLCLIVG FPTAYFIATR
PQHRRDMWML LIMIPFWTNL LIRTFAIMEL IRNQGTINTL LMASGLIDEP IQMLFTEFSV
LIGMTYVYLP LMILPIYASM ERLGFDLVEA GYDLYASRLD VLRRIIFPLV KPGVVAGSIL
VFVPCLGAYV TPRVLGGGKQ LMLGNLIELQ FGQLRNWPLG AALALTLLAV VMVALVFYVR
AIGREGESDV
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