| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0835 |
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| Symbol | |
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| ID | 4077541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 879761 |
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| End bp | 880786 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638006133 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_612830 |
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| Protein GI | 99080676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.632681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.843315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACATC TGATTGCAGC CACAACGCTT GCGACCGTCT CCGCGACGGC GGCCATGGCG
GAGGGGCAGT TGAATATCTA CAACTGGGGC AACTACACCA GCCCGGAATT GATCGAGAAG
TTCGAACAGG AGTTCGACAT CGACGTCACC ATCACCGACT ATGACAGCAA CGACACCGCA
CTGGCCAAGA TCAAGGCAGG TGGGCATGGC TTTGACATCG TGGTGCCGTC TGGCACCTAT
GTGCCGATCT TCATCGGCGA AGGCCTGTTG ATGAAGTCGA TGCCCAACCA GATGGAGAAC
TTCAAGAACA TGGACCCGCG CTGGGTCGAT GTGGATTTTG ATCCTGGCCG CGACTACACC
GTGCCTTGGC AATGGGGCAC CGTGGGCGTC ACCGTCAATA CTTCGGTTTA TTCAGGCGAC
ATCAACTCGG CGGCACTGAT CTTTGATCCG CCAGAAGAGC TGAAGGGCAA GATCAACGTC
GTTCCAGAGA TGCTCGACGT GATGGGCATG GCCATTCACT ACATGGGCGG AGAGCAATGC
ACCGCCGACA AGGACATGCT GGCCAAAGTG CGCGATAAAC TGGTCGAGGC CAAAAAGGAC
TGGCTCTCCA TGGCCTATGG CAACATCGAG AAGTTCGCCA AGGGCGACCT CGCGGCTGGG
GTCAATTGGA ACGGCGCCTC ATTCCGGGCA CGTCTGCAAA ACGATGACAT CGCCTTTGGC
TATCCACAGA CCGGGTTTTC GATCTGGATG GACAACGCCG CGATCCTCGC GGATGCGCAG
AATGTCGACA ATGCCAAACT GTTCCTGAAC TATATCATGG CTCCGGAGAA CGCAGCGCTT
CTGTCCAATT TTGCCCGCTA CGCCAATGGC ATCAAAGGAT CTGAACCCTT TATGGATGCG
GCCATGGCAG AGGCCTCCGA GGTGGTTATT CCCGACGAGC TCAAAGATGC CGGCTATCTC
GCCAAGACCT GCCCACCCGA CGTGCAGCGG ATCTATTCCA AGATCTGGAC CGAAGTGACC
AAATAA
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| Protein sequence | MRHLIAATTL ATVSATAAMA EGQLNIYNWG NYTSPELIEK FEQEFDIDVT ITDYDSNDTA
LAKIKAGGHG FDIVVPSGTY VPIFIGEGLL MKSMPNQMEN FKNMDPRWVD VDFDPGRDYT
VPWQWGTVGV TVNTSVYSGD INSAALIFDP PEELKGKINV VPEMLDVMGM AIHYMGGEQC
TADKDMLAKV RDKLVEAKKD WLSMAYGNIE KFAKGDLAAG VNWNGASFRA RLQNDDIAFG
YPQTGFSIWM DNAAILADAQ NVDNAKLFLN YIMAPENAAL LSNFARYANG IKGSEPFMDA
AMAEASEVVI PDELKDAGYL AKTCPPDVQR IYSKIWTEVT K
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