Gene TM1040_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0818 
Symbol 
ID4076207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp859121 
End bp859564 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content55% 
IMG OID638006116 
Producthypothetical protein 
Protein accessionYP_612813 
Protein GI99080659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0544708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00523274 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACCCTCG TCGCGGATGC GGCGCGGGCA GGAGATTATT GGATGCGGAA AATTCTAATT 
GCGGTAGCTA CCGTGGGTGC TATTGGTTTT GCCCCATCGA ACGCGCTAGG CGCGCCCAAA
CTAGATGAAC TTGGTAGCGA TGTTTCACTC TGCTGGAACG ACGAGGCGCT GAGCGACGAC
GCGGCCAGAG CCACGACAAC CGTGGAATTC CATGTGGGAC AAGATGGACT GGTGGATCTG
AACACCATCA AGATTGTTTC CAGCACTGCG ATCACTCAAA CAGCGTCCAA GCAAGCCTTT
GAAGCCGCTC GCAGGGCTAT AATCAGATGC CTGATGTCAG ATCCGGTTGA TTTGTCTTTC
TGGGACACCA CCTTGGAAGC GGTCTTTTCT GTCGCCACGG GTGTCAAAGT TCGCTACCAG
CCCAACACCA CGGTAGACAC ATGA
 
Protein sequence
MTLVADAARA GDYWMRKILI AVATVGAIGF APSNALGAPK LDELGSDVSL CWNDEALSDD 
AARATTTVEF HVGQDGLVDL NTIKIVSSTA ITQTASKQAF EAARRAIIRC LMSDPVDLSF
WDTTLEAVFS VATGVKVRYQ PNTTVDT