Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0818 |
Symbol | |
ID | 4076207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 859121 |
End bp | 859564 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638006116 |
Product | hypothetical protein |
Protein accession | YP_612813 |
Protein GI | 99080659 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0544708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00523274 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGACCCTCG TCGCGGATGC GGCGCGGGCA GGAGATTATT GGATGCGGAA AATTCTAATT GCGGTAGCTA CCGTGGGTGC TATTGGTTTT GCCCCATCGA ACGCGCTAGG CGCGCCCAAA CTAGATGAAC TTGGTAGCGA TGTTTCACTC TGCTGGAACG ACGAGGCGCT GAGCGACGAC GCGGCCAGAG CCACGACAAC CGTGGAATTC CATGTGGGAC AAGATGGACT GGTGGATCTG AACACCATCA AGATTGTTTC CAGCACTGCG ATCACTCAAA CAGCGTCCAA GCAAGCCTTT GAAGCCGCTC GCAGGGCTAT AATCAGATGC CTGATGTCAG ATCCGGTTGA TTTGTCTTTC TGGGACACCA CCTTGGAAGC GGTCTTTTCT GTCGCCACGG GTGTCAAAGT TCGCTACCAG CCCAACACCA CGGTAGACAC ATGA
|
Protein sequence | MTLVADAARA GDYWMRKILI AVATVGAIGF APSNALGAPK LDELGSDVSL CWNDEALSDD AARATTTVEF HVGQDGLVDL NTIKIVSSTA ITQTASKQAF EAARRAIIRC LMSDPVDLSF WDTTLEAVFS VATGVKVRYQ PNTTVDT
|
| |