Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0816 |
Symbol | |
ID | 4076205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 858386 |
End bp | 858688 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638006114 |
Product | hypothetical protein |
Protein accession | YP_612811 |
Protein GI | 99080657 |
COG category | [S] Function unknown |
COG ID | [COG4680] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0252247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00192585 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGATCA TCGCCAGAAA CACCATCACG GATTTTGCAG CGAACCACCC GGAAACCCGC GCGCCGTTGG AGCACTGGTT CCGCATCACC AAAGCAGCCG AATGGAACAC CCCACAAGAG GTTCTGGCTT CATTTTCCAA GTCCAAGGTT TTGAACGCTG AGCGTGTCAG GTTCGAAATC GGCGGCGGAG ATTACCGACT GATCGCAGCA TTCGATTTTC GCCGCAAGAT CGTGTTCATC AAGTTCATCG GCACCCATGC CGAATACGAC CGCATCGACG CCCTTACCGT TTCAAAGCAC TGA
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Protein sequence | MRIIARNTIT DFAANHPETR APLEHWFRIT KAAEWNTPQE VLASFSKSKV LNAERVRFEI GGGDYRLIAA FDFRRKIVFI KFIGTHAEYD RIDALTVSKH
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