Gene TM1040_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0816 
Symbol 
ID4076205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp858386 
End bp858688 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content54% 
IMG OID638006114 
Producthypothetical protein 
Protein accessionYP_612811 
Protein GI99080657 
COG category[S] Function unknown 
COG ID[COG4680] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0252247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00192585 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGATCA TCGCCAGAAA CACCATCACG GATTTTGCAG CGAACCACCC GGAAACCCGC 
GCGCCGTTGG AGCACTGGTT CCGCATCACC AAAGCAGCCG AATGGAACAC CCCACAAGAG
GTTCTGGCTT CATTTTCCAA GTCCAAGGTT TTGAACGCTG AGCGTGTCAG GTTCGAAATC
GGCGGCGGAG ATTACCGACT GATCGCAGCA TTCGATTTTC GCCGCAAGAT CGTGTTCATC
AAGTTCATCG GCACCCATGC CGAATACGAC CGCATCGACG CCCTTACCGT TTCAAAGCAC
TGA
 
Protein sequence
MRIIARNTIT DFAANHPETR APLEHWFRIT KAAEWNTPQE VLASFSKSKV LNAERVRFEI 
GGGDYRLIAA FDFRRKIVFI KFIGTHAEYD RIDALTVSKH