| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0815 |
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| Symbol | |
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| ID | 4076204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 858001 |
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| End bp | 858372 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006113 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_612810 |
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| Protein GI | 99080656 |
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| COG category | [K] Transcription |
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| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0785237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00186138 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTATTC GCCCAATTCG GGCAGACGCT GATCACGCTG CTGCCCTTTC TCGCATCGAA
GAACTTTGGG GTGCAGAACC TGGCACAGAA GCCGGTGACG AACTCGATAT CCTCGTTGAC
TTGGTTGAGC ACTATGAGGA ACGGCAGTTC CCTTTTCCAG AACTGGCGCC CATCGACCTT
CTGAAGGCGC ACATGGAAGC GACGGGGCGC ACCCAGGCAG ATCTGGCAGC GCTGCTAGGG
TCGCGCCCCC GCGCGTCCGA AGTCCTCAAC CGCAAGCGCG CCTTGACCGT TGACATGATC
CACAAGCTCA GCAGCGAGTG GCATATTCCT GCGGAATGCT TGGTTCGCCC CTATCATCTG
GAAGCCGCCT AG
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| Protein sequence | MTIRPIRADA DHAAALSRIE ELWGAEPGTE AGDELDILVD LVEHYEERQF PFPELAPIDL
LKAHMEATGR TQADLAALLG SRPRASEVLN RKRALTVDMI HKLSSEWHIP AECLVRPYHL
EAA
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