Gene TM1040_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0770 
Symboltgt 
ID4078082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp825392 
End bp826522 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content60% 
IMG OID638006067 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_612765 
Protein GI99080611 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.196276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC TTTTCAACTT TGAAATGACA GCAACGGACG GCAAAGCACG CACGGGTGTA 
ATCCATACAC CACGCGGCGA GATCCGTACC CCTGCTTTCA TGCCGGTAGG CACTGCTGCG
ACCGTCAAGG CGATGATGCC CGAAAGCGTG CGCGCAACCG GAGCGGACAT TCTGTTGGGC
AATACCTATC ACCTGATGCT GCGCCCGACT GCCGAACGGA TCGACCGTCT GGGGGGCTTG
CACAAATTCA TGAACTGGGA CCGCCCGATC CTCACCGACT CCGGCGGGTT TCAGGTGATG
TCGCTCGCGG GTCTGCGCAA GCTCACCGAA AAAGGCGTGA CGTTCAAATC TCATATCGAT
GGGTCGCGCC ACGAGCTGAC GCCGGAACGC TCGATGGAGA TTCAACGACT GCTGGGCTCT
GACATTGTGA TGTGTTTCGA CGAATGCCCC GCGCTGCCTG CCGACCGGGA TCGCATCGCC
GAGAGCATGC GTCTGTCGAT GCGCTGGGCG GAACGCTCGC GCGAGGCCTT TGGCGACCGG
CCGGGACATG CGCTCTTTGG CATTCAGCAG GGTGGGCTGG AACAGGATTT CCGCGAGGAA
AGCGCAGAAG CCCTCACCAA GATTGGCTTT GATGGCTACG CGGTGGGTGG TCTTGCGGTG
GGCGAGGGGC AAGAGGCCAT GTTTGGCTGT CTGGATTACG CGCCCGACAT GCTGCCGGTT
GATAAGCCGC GCTATCTGAT GGGCGTCGGC AAGCCCGATG ATATCGTGGG CGCGGTGTCC
CGTGGTATCG ACATGATGGA CTGCGTGTTG CCGTCGCGCT CTGGTCGCAC GGGGCAGGCG
TTCACTCGGC ATGGTGTGGT CAATATCAAG AATGCGCGCC ATCAGGACGA CCCGCGCCCG
CTGGATGAGA ATTGCAGCTG TCCGGCATGC AGCAATTATT CGCGCGCCTA TCTGCACCAC
GTGTTCCGGT CGAACGAGAT GATCTCCGGC ATGCTTTTGA CATGGCACAA CCTGCATTAC
TTCCAAGACA TCATGGCTGG CATGCGGGAG TCAATTGCAG CGGGCACATT TGAGGCGTGG
CAGAAGACGT TCCACGAGAC GCGCGCCCAA GGCGATATCG AGCCGCTCTG A
 
Protein sequence
MAELFNFEMT ATDGKARTGV IHTPRGEIRT PAFMPVGTAA TVKAMMPESV RATGADILLG 
NTYHLMLRPT AERIDRLGGL HKFMNWDRPI LTDSGGFQVM SLAGLRKLTE KGVTFKSHID
GSRHELTPER SMEIQRLLGS DIVMCFDECP ALPADRDRIA ESMRLSMRWA ERSREAFGDR
PGHALFGIQQ GGLEQDFREE SAEALTKIGF DGYAVGGLAV GEGQEAMFGC LDYAPDMLPV
DKPRYLMGVG KPDDIVGAVS RGIDMMDCVL PSRSGRTGQA FTRHGVVNIK NARHQDDPRP
LDENCSCPAC SNYSRAYLHH VFRSNEMISG MLLTWHNLHY FQDIMAGMRE SIAAGTFEAW
QKTFHETRAQ GDIEPL