Gene TM1040_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0762 
Symbol 
ID4076171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp818036 
End bp818818 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID638006059 
Productpantothenate kinase 
Protein accessionYP_612757 
Protein GI99080603 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTCG CGGTTGATTG CGGCAATACT AACACGGTTT TTGCGCTCTG GGATGGCGAT 
CAGATGATCG GCCACTGGCG CACGTCGACC GAATGGCAGC GCACGGCGGA TCAGTATTAT
GTCTGGCTCT CCACCTTGAT GAACCTGCAG GGCATCAAGG CTCAGATCAC GGATATGATT
ATCTCGTCGA CCGTGCCGCG TGTCGTGTTC AACCTGCGCG TTCTGTCGGA CCGCTACTTC
AACACCCGCC CGCTGGTGGT GGGTAAACCC GAATGCGCGC TTCCGGTGGA TGTGCGCGTC
GACGAAGGTA CCACCGTCGG CCCGGACCGG CTGGTCAATA CGGTGGCGGG GTATGAAAAA
TATGGCGGTG ATCTGATCGT CGTCGATTTT GGAACCGCAA CTACATTCGA TGTGGTGGCC
GCCGACGGCG CCTATGTGGG CGGAGTCATC GCGCCGGGGG TGAACCTCAG CCTGGAGGCG
TTGCACCATG CCGCCGCCGC GCTGCCACAC GTCGACATTT CGAAACCACA GAATGTCATC
GGCACCAACA CGGTGGCCTG CATGCAGTCT GGCGTCTTCT GGGGCTATGT CGGCCTCGTG
CGCGAGATCT GCGATCGCAT CAAGGCCGAA TCCGGTGTGC CGATGAAAGT CATATCAACC
GGCGGGCTGG CGCCGCTCTT CCAGCAGACA GCAGATCTAT TTGACGCATA TGAGGATGAC
CTGACCATGC AAGGTCTGAG GCGCATCCAC GAGCATAACA AGGATATCGG TAATCACGCA
TGA
 
Protein sequence
MLLAVDCGNT NTVFALWDGD QMIGHWRTST EWQRTADQYY VWLSTLMNLQ GIKAQITDMI 
ISSTVPRVVF NLRVLSDRYF NTRPLVVGKP ECALPVDVRV DEGTTVGPDR LVNTVAGYEK
YGGDLIVVDF GTATTFDVVA ADGAYVGGVI APGVNLSLEA LHHAAAALPH VDISKPQNVI
GTNTVACMQS GVFWGYVGLV REICDRIKAE SGVPMKVIST GGLAPLFQQT ADLFDAYEDD
LTMQGLRRIH EHNKDIGNHA