| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0759 |
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| Symbol | |
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| ID | 4076168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 814169 |
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| End bp | 815734 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006056 |
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| Product | NADH dehydrogenase subunit M |
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| Protein accession | YP_612754 |
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| Protein GI | 99080600 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATA TTCTCTCCAT CGTAACCTTC ATTCCCGCAC TGGCGGCCGC CGTGATGGCG
CTGTTGATGC GCGGAGACGA CGAGGCCGCA CAGCGCAACG CGAAATATGT TGCGCTGATG
GCCACCTCGA TCACCTTTAT CGTCTCGCTG TTCATCTATT TTCAGTTCGA TCCCTCCGAC
ACGGGCTTTC AGTTCGTTGA GGAACGGGAC TGGATCTTCG GGCTGAAGTA CAAGATGGGC
GTCGACGGCA TCTCTGTTCT GTTCGTGATG CTGACGACAT TTGTGATGCC GCTGACGATC
CTCGCCAGCT GGTCCGTGAC CAACCGCGTC AAGGAATACA TGATCGCCTT CCTGGTGCTT
GAGACGCTGA TGCTCGGCGT GTTCATGGCG CTCGACATGG TGCTCTTTTA CCTGTTCTTC
GAGGCTGGCC TCATCCCGAT GTTCCTCATC ATCGGCATCT GGGGCGGCAA GGACCGCATC
TACGCGTCGT TCAAATTCTT CCTCTACACC TTCTTTGGCT CGGTGCTGAT GCTGGTGGCG
ATGGTGGCAA TGTATTTTGA TGCGGGCACC ACCGACATTG TGAAACTGTT GTCGCACGAG
TTCTCCTATG AGGGTTTCAA TGTGCTCGGG ATTCACGTGC TGGGCGGCAT GCAGACGCTG
CTGTTCCTCG CCTTCTTTGC CTCTTTTGCG GTGAAGATGC CGATGTGGCC GGTTCACACC
TGGTTGCCGG ATGCGCACGT TCAGGCGCCG ACGGCGGGCT CCGTGGTGCT GGCGGCAATC
CTGCTGAAGA TGGGGGGCTA CGGCTTCCTG CGTTTCAGCC TGCCGATGTT CCCCGTGGGC
TCAGAGGTGA TGACCGATGT GATCCTGTGG ATGTCGGCGA TTGCGATTGT CTACACTTCG
CTTGTGGCGA TGGTGCAGGA AGACATGAAA AAGCTGATCG CGTATTCCTC GGTCGCCCAT
ATGGGCTTTG TGACCATGGG GATCTTTGCG GCGAACCAGC AGGGTGTGGA TGGTGCGATT
TTCCAGATGC TCAGCCACGG CTTCATCTCG GCGGCGCTCT TCCTATGCGT GGGCGTGATC
TATGATCGCA TGCACACCCG CGACATCGAC GCTTACGGTG GCCTCGTGAT CCGCATGCCG
GCCTATGCGC TTGTGTTCAT GTTCTTCACC ATGGGCAACG TCGGTCTGCC CGGCACCTCC
GGCTTTGTCG GCGAATTCCT GACCTTGATG GGCGCCTTCC AGGAGAACAC CTGGGTTGCG
TTTGTGGCCA CCACCGGTGT GATCTTTTCG GCGTGTTACG CGCTCTGGCT CTATCGTCGG
GTGGTTTTTG GCGACCTGAT CAAAGAGAGC CTGAAGGCGA TCAAGGACAT GAACGCCCGC
GAGAAATGGA TCTTTGCGCC GCTCATCGTC ATGACGCTCC TTTTGGGTGT CTATCCTTCT
GTTGTCACTG ACGTGATCGG TCCCTCGACC GAAGCGCTGG TGCAATCCGT CAACACGGCC
GTTGCCGACG CGGGGCCCCT CTGGGATGCC GCCGAGGTCG ATGTCGCCGC CACCAATTCC
CACTAA
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| Protein sequence | MDNILSIVTF IPALAAAVMA LLMRGDDEAA QRNAKYVALM ATSITFIVSL FIYFQFDPSD
TGFQFVEERD WIFGLKYKMG VDGISVLFVM LTTFVMPLTI LASWSVTNRV KEYMIAFLVL
ETLMLGVFMA LDMVLFYLFF EAGLIPMFLI IGIWGGKDRI YASFKFFLYT FFGSVLMLVA
MVAMYFDAGT TDIVKLLSHE FSYEGFNVLG IHVLGGMQTL LFLAFFASFA VKMPMWPVHT
WLPDAHVQAP TAGSVVLAAI LLKMGGYGFL RFSLPMFPVG SEVMTDVILW MSAIAIVYTS
LVAMVQEDMK KLIAYSSVAH MGFVTMGIFA ANQQGVDGAI FQMLSHGFIS AALFLCVGVI
YDRMHTRDID AYGGLVIRMP AYALVFMFFT MGNVGLPGTS GFVGEFLTLM GAFQENTWVA
FVATTGVIFS ACYALWLYRR VVFGDLIKES LKAIKDMNAR EKWIFAPLIV MTLLLGVYPS
VVTDVIGPST EALVQSVNTA VADAGPLWDA AEVDVAATNS H
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