| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0748 |
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| Symbol | |
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| ID | 4076157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 804573 |
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| End bp | 805871 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006045 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_612743 |
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| Protein GI | 99080589 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.147388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGG ATCAGGACCG GATCTTTACC AACCTTTACG GGATGCACGA ACGCACGTTG
GCGGGCGCAC AAAAGCGCGG CCACTGGGAC GGTACGGCGG GCCTCATTGA AAAAGGGCGC
GACTGGATCA TCCAGACCAT GAAGGATTCC GGCCTGCGCG GGCGTGGCGG TGCGGGCTTC
CCCACCGGCC TCAAATGGTC CTTCATGCCC AAGGAAAGCG ACGGGCGTCC CGCCTATCTG
GTCATCAATG CTGATGAGTC CGAGCCCGGC ACCTGCAAAG ACCGCGAAAT CATGCGTCAC
GATCCGCATA CGCTGATCGA GGGCGCGCTG ATCGCTTCCT TCGCGATGAA CGCGCACACC
TGCTACATCT ATCTGCGCGG CGAATATATC CGCGAGCGCG AGGCGCTGCA GGCCGCCATC
GACGAATGCT ACGACAAGGG TCTTCTGGGC AAGAACGCTG CAGGCTCGGG CTGGGATTTC
GATCTTTTCC TGCACCACGG GGCAGGGGCT TATATCTGCG GCGAGGAAAC CGCCCTGATC
GAGAGCCTTG AGGGCAAAAA AGGCATGCCG CGCATGAAGC CGCCATTCCC GGCAGGCGCG
GGGCTTTATG GCTGCCCGAC CACGGTGAAC AATGTCGAAT CCATCGCCGT GGTGCCCACC
ATCCTGCGGC GCGGTGCGGA GTGGTTTGCC GGCTTTGGCC GTCAGAACAA CGCGGGCACC
AAGCTTTTTG CGATCTCCGG TCACGTCAAC AACCCCTGCG TTGTTGAAGA GGCCATGTCG
ATCAGCTTTG AAGAGCTGAT TGAAAAACAC TGCGGTGGCA TTCGCGGCGG CTGGGACAAT
CTTCTGGCGG TGATCCCAGG CGGCTCTTCA GTGCCCTGTG TGCGCGGCGA GAAGATGCGC
GATGCGATCA TGGATTTTGA TTACCTGCGC GGCGAGTTGG GCTCTGGCCT TGGCACTGCG
GCGGTGATCG TGATGGACAA GCAGACCGAT ATCGTCAAAG CGATCTGGCG CCTCTCGAAG
TTCTACAAGC ACGAAAGCTG CGGCCAGTGC ACGCCCTGCC GTGAAGGCAC CGGCTGGATG
ATGCGCGTGA TGGATCGTCT GGTGCGCGGT GAGGCGGAGC TTGAAGAGAT CGACATGCTC
TGGGATGTCA CCAAGCAGGT CGAAGGCCAC ACCATCTGTG CACTGGGCGA TGCGGCCGCA
TGGCCCATTC AGGGTCTCAT TCGCAACTTC CGTGAAGAGA TCGAAGATCG CATCAAGGCG
CAGAAATCTG GCCGTATGGG CGCGATGGCA GCGGAATAA
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| Protein sequence | MLKDQDRIFT NLYGMHERTL AGAQKRGHWD GTAGLIEKGR DWIIQTMKDS GLRGRGGAGF
PTGLKWSFMP KESDGRPAYL VINADESEPG TCKDREIMRH DPHTLIEGAL IASFAMNAHT
CYIYLRGEYI REREALQAAI DECYDKGLLG KNAAGSGWDF DLFLHHGAGA YICGEETALI
ESLEGKKGMP RMKPPFPAGA GLYGCPTTVN NVESIAVVPT ILRRGAEWFA GFGRQNNAGT
KLFAISGHVN NPCVVEEAMS ISFEELIEKH CGGIRGGWDN LLAVIPGGSS VPCVRGEKMR
DAIMDFDYLR GELGSGLGTA AVIVMDKQTD IVKAIWRLSK FYKHESCGQC TPCREGTGWM
MRVMDRLVRG EAELEEIDML WDVTKQVEGH TICALGDAAA WPIQGLIRNF REEIEDRIKA
QKSGRMGAMA AE
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