| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0744 |
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| Symbol | |
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| ID | 4076153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 801379 |
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| End bp | 802590 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006041 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_612739 |
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| Protein GI | 99080585 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCT CCAAATTCGA CGACGCCCAG ACGGGCGAAC AGAAAATCCG TAACTTCAAC
ATCAACTTCG GCCCGCAGCA CCCTGCGGCG CACGGCGTGC TGCGTCTGGT GCTGGAACTG
GATGGCGAGA TCGTGGAACG CTGCGACCCG CACATCGGTC TTCTGCACCG TGGCACCGAA
AAGCTGATGG AAAGCCGCAC CTACCTGCAG AACCTGCCGT ATTTCGACCG CCTCGACTAT
GTGGCGCCGA TGAACCAGGA GCACGCTTGG TGTCTGGCAA TCGAAAAGCT GACTGGCGTG
GAGGTCCCCC GCCGTGCGCA GCTGATCCGA GTGCTCTATT CTGAGATCGG CCGTATCCTC
AATCACCTCT TGAACATCAC CACTCAGGCG ATGGACGTGG GCGCGCTGAC GCCGCCGCTC
TGGGGCTTTG AGGAACGCGA GAAGCTGATG ATCTTCTACG AGCGGGCCTG TGGTGCACGC
TTGCACGCGG CCTACTTCCG CCCTGGTGGC GTGCATCAGG ATCTGCCGGA CGAGCTGCTG
GATGATATCG ACCTCTGGGC GATGGAATTT CCGAAGGTCA TGGACGACAT CGACGGCCTC
TTGACCGAGA ACCGGATCTT CAAGCAGCGC AACTGCGACA TTGGCGTAGT CACCGAGGAT
GACATCCAGA AGTATGGCTT CTCCGGTGTG ATGGTGCGCG GGTCTGGCCT GGCTTGGGAT
TTGCGCCGCG CGCAGCCCTA TGAATGCTAC GACGAGTTCG ATTTCCAGAT CCCGGTCGGC
AAGAACGGCG ACTGCTACGA TCGCTATCTG GTGCGGATGG AAGAGATGCG TCAGTCGCTC
TCGATCATCC GTCAGGCTAT CGCAAAATTG CGCGAGGCCA CCGGTGACGT TCTGGCCCGT
GGCAAGCTCA CCCCGCCTAA GCGCGGCGAT ATGAAGACCT CGATGGAGAG CCTGATCCAC
CACTTCAAGC TCTACACCGA AGGCTTCCAT GTTCCCGAGG GCGAGGTCTA TGCCGCTGTC
GAGGCGCCCA AAGGCGAATT TGGCGTCTAT CTCGTGGCGG ATGGCAGCAA CAAGCCCTAC
CGCGCCAAGC TGCGCGCACC GGGGTTCTTG CATCTTCAAG CGATGGATTA CGTCGCCAAG
GGCCACCAGC TTGCGGATGT CGCTGCAATT ATTGGAACCA TGGACATCGT GTTTGGAGAG
ATTGACCGAT GA
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| Protein sequence | MDGSKFDDAQ TGEQKIRNFN INFGPQHPAA HGVLRLVLEL DGEIVERCDP HIGLLHRGTE
KLMESRTYLQ NLPYFDRLDY VAPMNQEHAW CLAIEKLTGV EVPRRAQLIR VLYSEIGRIL
NHLLNITTQA MDVGALTPPL WGFEEREKLM IFYERACGAR LHAAYFRPGG VHQDLPDELL
DDIDLWAMEF PKVMDDIDGL LTENRIFKQR NCDIGVVTED DIQKYGFSGV MVRGSGLAWD
LRRAQPYECY DEFDFQIPVG KNGDCYDRYL VRMEEMRQSL SIIRQAIAKL REATGDVLAR
GKLTPPKRGD MKTSMESLIH HFKLYTEGFH VPEGEVYAAV EAPKGEFGVY LVADGSNKPY
RAKLRAPGFL HLQAMDYVAK GHQLADVAAI IGTMDIVFGE IDR
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