| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0727 |
|---|
| Symbol | |
|---|
| ID | 4076097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 783823 |
|---|
| End bp | 785631 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638006024 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_612722 |
|---|
| Protein GI | 99080568 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TTATCGGAGT TCTGGGCAAC CATGAAGTCT CGCCCATTTT GGTCGAAGCG
CTGAAACGGC TGGAATATCG CGGATATGAC AGTGCAGGCA TTGCCACGGT GAACGGCGGG
CATCTGGACC GGCGCCGCGC GGTGGGCAAG CTGGTGAACC TTTCGGATAC TTTGGTGCAT
GATCCGCTGC CCGGCAAATC CGGCATTGGG CACACCCGCT GGGCCACCCA CGGCGCGCCG
ACGGTCTCTA ACGCGCATCC GCATCAGGCG GGCTGCGTCG CAGTGGTTCA CAACGGGATC
ATCGAGAACT TCAAGGAATT GCGCGACGAA CTGGCGGCTC ATGGCATCCG CTTTGTGACC
GAAACCGACA CAGAAACCGT GGCGCTCTTG TGCGAATTCT ACATGCGCGA CGGCACCTCT
GCCGCAGAGG CGGCACGCAA GACCGTGGCA CGGCTTGAAG GGGCCTTTGC GCTGGCGTTC
TTGTTTGATG GCGAAGAGGA CCTTCTGATT GCCGCCCGCA AGGGATCGCC CCTGGCCGTA
GGCCATGGCG AGGGCGAAAT GTATGTCGGT TCCGACGCGA TTGCGCTGGC GCCGCTGACG
GATCAGATCA CCTACCTCGA AGAAGGGGAT TTTGTGGTCC TGACGCGCAA CAGCCATGAA
ATCTGGGACG CCAAGGGCAA CATCGCCAAC CGCGAAAAAC GCCAGATCAA ACTGGAGAAC
ACCCGCGTCG AAAAAGATGG CCACAAGCAT TTCATGGCCA AGGAAATCGC CGAACAGCCC
GTCGCCGTTG ACAAGGCGCT GAAGGCTTAT CTGGACGACA GCTGCGCGAT TGAGCTGCCC
GAAGGGCTGG ATTTCAAAAA GATCGAGCGG CTTTCGCTCG TGGCCTGCGG CACTGCCTAC
TACGCGTGTC TGGTGGCGAA ATACTGGCTG GAAACGATCG CTCGCCTGCC CGTTGAGGTC
GATGTGGCCT CGGAATTTCG CTACCGCGAG CCCCCCGTCG GCCCCGGCAC GCTGGCGCTC
TTTGTCAGCC AGTCGGGCGA AACCGCGGAC ACTCTGGCAG CGCTGCGCTA CATGCGAGGG
AAGGCCGATG TGATCGCCGG GTTGGTGAAT GTGCCCGAAA GCTCAATCGC GCGTGAAAGC
GATGTGGTGC TGCCCATCCA CGCCGGCCCG GAAATCTCCG TAGCATCGAC CAAAGCCTTT
ACCTGTCAGT TGACGGTGCT TTTGATGCTC GCGCTCAAGG CAGCACAGGA TCGCGGACAG
AAGCTGCCCG CAGGCATGCC CGCTGACTTG CGTGCCCTGC CCGGCCTGAT CCATCAGTCG
CTGGCCTCTG AGGCGCAGAT CGCTGCTGCC TCACGCGATC TGGCCGGCGC ACGCGACATC
ATTTTCCTCG GGCGCGGCGC CCTCTACCCG CTGGCTCTTG AGGGGGCGCT CAAACTCAAG
GAGCTGAGCT ATATCCACGC CGAAGGTTAT GCCTCGGGCG AGCTGAAACA CGGGCCCATC
GCGCTCATTG ATGACAGCGT GCCAGTGATT GTCATGGCAC CGCGCGATGC GCTCTTTGAA
AAAACCATCT CCAATATGCA GGAGGTGATG GCGCGCGGTG GTCGGGTTAT TCTTGTGACC
GACGCCGAAG GCGCGCGCGA GGCCTCCGAG GGCACCGCTG AGGTCATTAC CATGCCGCAG
GTACCCGACG CACTGGCCCC GATCCTCTAT GCGATCCCGG CACAGCAGAT CGCCTATTTC
ACCGCCATTG CCAAAGGCAC CGATGTGGAC CAGCCGCGCA ACCTGGCCAA ATCCGTGACC
GTCGAATGA
|
|---|
| Protein sequence | MCGIIGVLGN HEVSPILVEA LKRLEYRGYD SAGIATVNGG HLDRRRAVGK LVNLSDTLVH
DPLPGKSGIG HTRWATHGAP TVSNAHPHQA GCVAVVHNGI IENFKELRDE LAAHGIRFVT
ETDTETVALL CEFYMRDGTS AAEAARKTVA RLEGAFALAF LFDGEEDLLI AARKGSPLAV
GHGEGEMYVG SDAIALAPLT DQITYLEEGD FVVLTRNSHE IWDAKGNIAN REKRQIKLEN
TRVEKDGHKH FMAKEIAEQP VAVDKALKAY LDDSCAIELP EGLDFKKIER LSLVACGTAY
YACLVAKYWL ETIARLPVEV DVASEFRYRE PPVGPGTLAL FVSQSGETAD TLAALRYMRG
KADVIAGLVN VPESSIARES DVVLPIHAGP EISVASTKAF TCQLTVLLML ALKAAQDRGQ
KLPAGMPADL RALPGLIHQS LASEAQIAAA SRDLAGARDI IFLGRGALYP LALEGALKLK
ELSYIHAEGY ASGELKHGPI ALIDDSVPVI VMAPRDALFE KTISNMQEVM ARGGRVILVT
DAEGAREASE GTAEVITMPQ VPDALAPILY AIPAQQIAYF TAIAKGTDVD QPRNLAKSVT
VE
|
|---|
| |