Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0723 |
Symbol | |
ID | 4077000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 780104 |
End bp | 781408 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006020 |
Product | three-deoxy-D-manno-octulosonic-acid transferase-like |
Protein accession | YP_612718 |
Protein GI | 99080564 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.717213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC CATCGCAGGT CGCCCCGACC CTGCTCTATC ACCTCTATCG CGGTGCCAGC ACGCTCTTGG CGCCGCTGAT GTGGTCCAAA GTTGCAGGCA AGCTGCGTGC GCATGGGCTT CCGGAAGAAC GGGTTCGTGA ACGCCTCGGG CACGCGACCC TGCAGCGCCC CAAGGGCCGA CTGATCTGGT TTCATGCCGC CTCTGTCGGC GAGAGCCTGT CGGTCCTCAC GCTGATCAAA CGTCTGGGCA CCATGGCGCC GGATCTGGAA TTCCTGATCA CCTCGGGCAC ACCCACATCT GCCGATCTGG TCGCAAAACG CCTGCCTCCC CGCACCCGCC ACCAGTTTCC GCCTCTGGAC ACCAGAGCCG CGGTGACGCG ATTTCTGAAC CATTGGCAGC CGGACCTCGG GGTCTTTGTC GAAAGCGAGC TTTGGCCGCA AATGCTGGTG CGCGCGCGCG ATGCGGGCGT CCCATTGGTG CTGCTCAATG CGCGTCTTTC GCCCAAATCG GTCGCCAGCT GGAAGAAACG GCACGCCACC GCGCGGTTTC TACTGGATCA GCTTGCGCTG ATGCTCACCC AGAACAGCCA GACGGCGATC AACCTCAAGG CCATTGGTGC AGACCCCACA CGTTTGCGCG CTGGCAGCAA CCTTAAGGCG CTCTCGGAGC CCCTGCCAGT GGATCAGGCC ATCCTGGAGG ACGTCCGGGA CGCAATCGGT GCGCGACCGG TCTGGGTCGC TTCCTCCACC CATGAGGGCG AGGAGGAAGT CGTGTTAGAG GCGCATAGAG CGCTCTTGGC GGATCATCCG GATCTGCTGC TCTTGCTCGC GCCACGCCAC CCACACCGGG GCGATCAAAT CGAAGCGATG ATTGCCGAGG CAGGCCTCAC TTCCATTCGG CGCAGTCGGG ACGCCCTGCC CCGCACCTCG ACACAGGTGT ATCTTGCGGA CACATTGGGC GAAGTGGGCA TCTGGTACAG CCTGTGCCCA CGGGTCTTCC TTGGCGGTTC TCTCCGCGAA ATCGGAGGGC ACAACCCCTT TGAGGTGATG CAAGCGGGAG GCGCGGTGCT GACTGGGTCC GGGGCCTATA ATTTTGCCGA ATCCTTTGCG GAGCTGATCG AGCTAGGCGC GGCCCATGAA GTTCAGGATG CCAGCTCGCT TGCCGACGCG GTCAGGACTT GGCTCGACGC GCCGCATACC CTAGACACGG CCCGCGCGCG GGCACGCGAT TTTCTGGCCC GCCAATCCGA CCAGATGGAT GACACTGTGA CGGCGCTGCT CGACTTGCTG CCGTCCCCCA CATAA
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Protein sequence | MTDPSQVAPT LLYHLYRGAS TLLAPLMWSK VAGKLRAHGL PEERVRERLG HATLQRPKGR LIWFHAASVG ESLSVLTLIK RLGTMAPDLE FLITSGTPTS ADLVAKRLPP RTRHQFPPLD TRAAVTRFLN HWQPDLGVFV ESELWPQMLV RARDAGVPLV LLNARLSPKS VASWKKRHAT ARFLLDQLAL MLTQNSQTAI NLKAIGADPT RLRAGSNLKA LSEPLPVDQA ILEDVRDAIG ARPVWVASST HEGEEEVVLE AHRALLADHP DLLLLLAPRH PHRGDQIEAM IAEAGLTSIR RSRDALPRTS TQVYLADTLG EVGIWYSLCP RVFLGGSLRE IGGHNPFEVM QAGGAVLTGS GAYNFAESFA ELIELGAAHE VQDASSLADA VRTWLDAPHT LDTARARARD FLARQSDQMD DTVTALLDLL PSPT
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