| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0718 |
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| Symbol | |
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| ID | 4076995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 775182 |
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| End bp | 776354 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006015 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_612713 |
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| Protein GI | 99080559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.178083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTC GGAATCGCTT TGCCGAGATG CTGCCCGAAA TCACCGCTTG GCGTCATGAT
TTTCACGAAC ATCCCGAGTT GATGTATGAC GTGCATCGCA CCGCCGGACT GGTTCAGGAG
CGCCTCAATG CCTTTGGCTG TGACGAGGTA GTGCCGGGTA TCGGCAAGAC CGGTGTTGTC
GGCGTCATCA AGGGCAAGAG CACCGCATCG GGCAAGGTGA TCGCCCTGCG TGCCGACATG
GATGCACTGC CGATCCACGA GGAAACAGGC CTAGATTATG CGTCCAAGAC GCCTGGCAAA
ATGCATGCCT GTGGTCATGA CGGCCACACC GCGATCCTCT TGGGCGCTGC AAAATACCTC
TCCGAGACGC GCAACTTTGA TGGCACGGTG GTTCTGCTGT TCCAGCCCGC AGAGGAAGGT
GGGGCCGGAG GCAAGGCGAT GGTCGACGAT GGGGTGATGG ATCGTTGGGG CGTCCAGGAG
GTTTACGGGT TGCACAATAT GCCCGGCCTG CCAATGGGCC ATATCGCGAC CCGTGTTGGC
GGGCTCTTGG CCTCTTCGGA CGAGTTCGAG ATCGAAGTGA CCGGCAAGGG CGGCCACGCC
GCGGCACCGC ATGACGCGAT CGACACCACG CTAGTGGCCT CGCAGATCGT GGTCTCGCTT
CACTCTATCG TGTCGCGCAA CATCGATCCC ATTCATCGCG TGGTGCTGAC CGTCGGCACA
TTTGAGACCG ACAGCACGGC GTCGAATGTG ATCGCCCATC GCGCCAAGCT CAAAGGCACG
GTACGCACGC TCGACTCCGA AAACCGCGCC TTGGCAGAAG AGCGCGTGCG TCGCGTGGCC
GAAGATACCG CCTCGGCTTT CGGGGCGAAT GCCACGGTCA AATGGACCCC AGGTTATCCG
GTCACGGAAA ACACCGCCCA AGAGGTTGAA TATGCGGTGG AGGCCGCCAG AGCAGTTGCC
GAGAAAGTCG ACCCTGATGC GGCGCCCATC ATGCCGTCGG AGGATTTCGC CTACATGCTT
GAAGCGCGCC CCGGCGCCTA TATCTTCTTG GGCAATGGCG ACACGGCCAT GTGTCATCAC
CCGGCCTATC AGTTCGACGA CTGCGCCATC CCGCTTGGGT GCAGCTGGTT TGTCGAGCTT
TGTGAACGCC GCATGCCCGC CAGCTCATCA TAA
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| Protein sequence | MPVRNRFAEM LPEITAWRHD FHEHPELMYD VHRTAGLVQE RLNAFGCDEV VPGIGKTGVV
GVIKGKSTAS GKVIALRADM DALPIHEETG LDYASKTPGK MHACGHDGHT AILLGAAKYL
SETRNFDGTV VLLFQPAEEG GAGGKAMVDD GVMDRWGVQE VYGLHNMPGL PMGHIATRVG
GLLASSDEFE IEVTGKGGHA AAPHDAIDTT LVASQIVVSL HSIVSRNIDP IHRVVLTVGT
FETDSTASNV IAHRAKLKGT VRTLDSENRA LAEERVRRVA EDTASAFGAN ATVKWTPGYP
VTENTAQEVE YAVEAARAVA EKVDPDAAPI MPSEDFAYML EARPGAYIFL GNGDTAMCHH
PAYQFDDCAI PLGCSWFVEL CERRMPASSS
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