| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0706 |
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| Symbol | pepN |
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| ID | 4076983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 756633 |
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| End bp | 759197 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006003 |
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| Product | aminopeptidase N |
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| Protein accession | YP_612701 |
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| Protein GI | 99080547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.281728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACG CCGCCCCAAG CACGCAGCCA GAGACCTTCT ACCTGAAGGA CTACACCCCG
TTTGGCTATG TGGTGGAGCG CGTCGAGCTG GTATTTCGTC TCTCGCCCGA GGCAACACGG
GTGCTGTCCA AGATCCGTTT TGCACCCAAC CCTGATGTCT CAGATCGGGT GTTCTTTCTG
CATGGCGAGA AGCTTAAGCT GATTTCAGCA CAGATTGATG GGGAAGAGGT CGCGCCCAAT
GTCACCGACA CGGGCCTCAG CTGCGAGGTG CCGGACACGC CCTTCACATG GGAAGCAGAG
GTCGAGATCA ACCCAAAGGC CAATACCGCG CTCGAGGGGC TTTATATGTC GAATGGCATG
TATTGCACCC AATGCGAGGC CGAAGGGTTC CGCAAGATCA CCTATTATCC CGACCGCCCC
GATGTCATGA GCACCTTCAA TGTCCGTATC GAGGGCGACG AAAAGGTGAT GCTGTCCAAC
GGCAACCCTG GCGAAAGCGG TGAGGGCTTT GCCGAATGGC ACGATCCCTG GCCCAAACCA
GCCTATCTCT TTGCATTGGT GGCGGGCGAT CTGGTCAACC ATCCCGATCG TTTCACCACG
CGCTCGGGCA AGGATGTGGA ACTCAATATC TGGGTGCGGC CCGGTGACGA GGGCAAATGC
GCCTTTGGGA TGGAGGCGCT CAAGAAGTCG ATGACCTGGG ACGAAGAGGT CTATGGGCGT
GAGTACGATC TCGACGTGTT CAACATCGTT GCAGTCGATG ACTTCAACAT GGGCGCAATG
GAGAACAAAG GATTGAACAT TTTCAACTCC TCCTGCGTTC TGGCCAGCCC TGAAACCTCG
ACAGATGCCA ATTTCGAACG GATCGAGGCG ATCATCGCCC ATGAGTATTT TCACAACTGG
ACCGGCAACC GGATCACCTG CCGGGACTGG TTCCAGCTGT GCCTCAAGGA AGGTCTGACA
GTCTATCGCG ATGCGCAGTT CACCGCCGAC ATGCGCTCTG CTCCGGTGAA ACGGATCGAA
GACGTGATCG AGTTGCGCGC GCGCCAGTTC CCCGAGGACA ACGGTCCGCT CGCCCACCCT
GTCCGCCCCG AAGCCTTCCA AGAGATCAAC AATTTTTACA CCGCAACGGT CTATGAGAAG
GGTGCCGAGG TGATCGGCAT GCTCAAACGT CTGGTCGGTG ATGAGGCCTA TTACAAGGCG
CTCGATCTCT ATTTTGATCG TCACGATGGG CAGGCCTGCA CCATCGAGGA CTGGATCAAG
GTGTTCGAGG ACTCCACGGG ACGAGATCTG GCACAATTCA AGAATTGGTA CAGCCAGGCC
GGCACGCCGC GCCTCTCGGT CGAAGAGAGC TTTGAGGATG GCACCTACAC GCTCACCTTC
CGGCAGATGA CTCCCCCCAC ACCTGGACAG GACCACAAGG ATCCAAAGGT GATCCCGATT
GCGGTGGGGC TGCTCAGCCC CACTGGCGAC GAAGTGCTGC CAACCACCGT GCTCGAAATG
ACAGAGGCAG AGCAGAGCTT TTCCTTTGAA GGCTTCAAGA CGCGACCGAT CCCGTCGATC
TTGCGCGATT TCTCTGCTCC GGTGATCCTG ACCCGCGAAA GCTCTGCCAA AGAACGCGCT
TTCTTGCTGG CACATGACAC CGACCCCTTT ACCCGTTGGG AAGCGGGCCG TGAGCTTGCC
AAAGCCTCTC GCATCGCGAT GGTAACCGAC GGTGCCAGCC CAGACTCGAA CTATCTTGAG
GCGCTGCAGT CCCTGGTGCG CGACGATCAC CTTGATCCGG CCTTTCGCGC CCTGGTTCTG
GCACCTCCCA CCGAGAGCGA GATTGCACAG GCACTGGCAG ATCAGGGCGT AACACCCGAC
CCGGACGCAA TCCACGACGC GGCAGAGACC TTTGCGCAGA CATTGGCACA GAGCCTGTCC
GACAGCCTCC CACGCCTGTT TGCAGCCACT TTGGTCGATG GCGCCTATGT GCCGGATGCC
AAGGGCGCCG GACTGAGGGC GCTCAACGGG CGTATCCTTG GACTGTTGAC CCGGATTGAT
GGGGGCGAGG CCGCGACCAA GCAATTTGAG ACCGCCAACA ATATGACCGT GCAGAACTCG
GCGCTGGCTT GCCTGCTCAA GGCCGAGAAG GGTGACGCGC AATCACAGGC CTTCTTTGAG
CAGTGGCAAG ATGATCGTCT GGTAATGGAC AAGTGGTTCG GGCTTCAGGT GGCCACGGCC
CGCCCCGAAC GCGCACCTGC CATCGCCCAG AGCCTGACCG AACATCCGCT GTTCACGATC
AAGAACCCCA ACCGTTTTCG GGCTGTGATG GGGGCGTTGG CAATGAACCA TGCCGGGTTC
CACAAGGCCG ACGGCAGCGG ATATCGCTTG CTCGCCGATC AGTTGATCGC GCTGGACCCG
CTGAACCCGC AGACCACCGC GCGTATGTGC AGCGCCTTCC AAACATGGAA GCGCTATGAT
GCCGGACGTC AGGACAAGAT CAGAGCAGAA CTCAAGCGGA TCAAGGCAAC CGAGGGGCTG
AGCCGGGATA CCAACGAGAT GGTGAGCCGT ATCCTTGACG CCTGA
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| Protein sequence | MKDAAPSTQP ETFYLKDYTP FGYVVERVEL VFRLSPEATR VLSKIRFAPN PDVSDRVFFL
HGEKLKLISA QIDGEEVAPN VTDTGLSCEV PDTPFTWEAE VEINPKANTA LEGLYMSNGM
YCTQCEAEGF RKITYYPDRP DVMSTFNVRI EGDEKVMLSN GNPGESGEGF AEWHDPWPKP
AYLFALVAGD LVNHPDRFTT RSGKDVELNI WVRPGDEGKC AFGMEALKKS MTWDEEVYGR
EYDLDVFNIV AVDDFNMGAM ENKGLNIFNS SCVLASPETS TDANFERIEA IIAHEYFHNW
TGNRITCRDW FQLCLKEGLT VYRDAQFTAD MRSAPVKRIE DVIELRARQF PEDNGPLAHP
VRPEAFQEIN NFYTATVYEK GAEVIGMLKR LVGDEAYYKA LDLYFDRHDG QACTIEDWIK
VFEDSTGRDL AQFKNWYSQA GTPRLSVEES FEDGTYTLTF RQMTPPTPGQ DHKDPKVIPI
AVGLLSPTGD EVLPTTVLEM TEAEQSFSFE GFKTRPIPSI LRDFSAPVIL TRESSAKERA
FLLAHDTDPF TRWEAGRELA KASRIAMVTD GASPDSNYLE ALQSLVRDDH LDPAFRALVL
APPTESEIAQ ALADQGVTPD PDAIHDAAET FAQTLAQSLS DSLPRLFAAT LVDGAYVPDA
KGAGLRALNG RILGLLTRID GGEAATKQFE TANNMTVQNS ALACLLKAEK GDAQSQAFFE
QWQDDRLVMD KWFGLQVATA RPERAPAIAQ SLTEHPLFTI KNPNRFRAVM GALAMNHAGF
HKADGSGYRL LADQLIALDP LNPQTTARMC SAFQTWKRYD AGRQDKIRAE LKRIKATEGL
SRDTNEMVSR ILDA
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