| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0693 |
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| Symbol | |
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| ID | 4077360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 743914 |
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| End bp | 745608 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005990 |
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| Product | Cl- channel, voltage gated |
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| Protein accession | YP_612688 |
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| Protein GI | 99080534 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0559233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000374815 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCGAC GGGAAAGTAG TCCCCTGTCT GAATATCTCG CCAATACCAA GGCGCGCTTG
CGGGATGCCC GTCGTGTATT GGTTCACCGT GGACCAAGTC AGCTGCAATT CTGGTTGATT
GCTCTGGTCA TTGGGGTGCT CGCTGGCTTT GCCGCTTTGT TCTTTCGCAA AGGCATTACC
GCGCTACAAG GGGCCGTCTA CGGCGCCGAG GATGTGGACT ACCTGCATAG TTTCGCCGCA
ACGCTGCCGT GGTACGTGCT GTTGCTGGTG CCGGTATTCG GCGGGTTGAT CGTCGGGATC
ATTCTGCACC GCTTTACGCC AGACGGGCGG GTACGATCCG TCGCCGATGT GATCGAAGGC
GCGGCCCTCA GAGATGGGCG CGTCGAGATC CGCGAGGGGT TGGCCTCGGC CTGCGCGTCC
TTTTTGACCC TCTCGACCGG GGGCTCTTCC GGGCGCGAGG GGCCGGTGGT CCATATCGCA
GGCATGATCT CTACCTGGGT GAGCGACCGC ATCCGTGCCG ATGGCATCAC TGGGCGGGAC
CTCCTGGGTT GCGCGGTTGC GGCAGCGGTT TCTGCCAGTT TTAACGCCCC GATTGCCGGC
GCTCTTTTTG CCATGGAAGT GGTGCTCAGG CATTTTTCCG TAAACACCTT CGCGCCCATC
GTGGTGGCCT CGGTGGCAGG CACTGTCATC AATCGGCTTG AGTATGGGGA TGTCACGGAA
TTTGTGCTCA CGACGCCCGG TGCGTTGCAA TTCTACGTCG AGTTGCCAGC GTTCCTGATG
CTTGGTCTGA TCTGTGGCGT CGTCGCGGTT GTGCTGATGC ATTCAATCTT TTTGGCGGAT
CGGGTGGGGA CGGCTGTGCA ATCGGCGCTT GGCATGCCGC GCTGGTTGCG CCCGACCGTA
GCTGGGTTTT TGCTTGGTCT GGTCGCAATC TGGTATCCGC ATATCATTGG TGTTGGATAC
GAGACGACCG TGCTCGCCCT GTCTGGGAGC CTGCTGCTCA GCCAGGCTAT CCTGTTCACG
ATTGTCAAAG TGGCTGCAGT CTCCATCACC ATGGGCGGGC GCATGGGGGG CGGGGTGTTT
TCCCCCTCGT TGATGGTTGG GGCGCTGACC GGGCTTGCCT TTGGCCTCAT TGCGACGAAT
TTCCTGCCGG ATGTCTCGGG TACGCATACG CTCTATGCTT TTGCGGGGAT GGGCGCTGTC
GCCGCTGCGG TGCTGGGTGC GCCCATTTCG ACCACGCTCA TTGTGTTTGA ACTGACAGGC
GACTGGCAGA TCGGCCTTGC GGTGATGGTA TCGGTGTCGA TGTCCACGGC GTTGGCCTCG
CGGATGGTGG ACCGCTCGTT CTTCCTGACC CAGCTTGAAA AACGCGACCT GCATTGCGCG
GCGGGTCCGC AGGCCTACCT CTTGGGCACT CTGCGGGTGG GCAAGGTCAT GCGGCCCTTG
GCGGATAGTG ATCCCGAGAG CGCACAGGCG CTGATCGATG AAGGCATCGC CATCAGCCCC
ACCTCCACGC TGGAGGCGGC GCTGCCGATT TTTGACCGGG CAGGGGTGGA GTATATCCCG
GTGGTCACTG AAGAAGAGTT CTCAGAAGAG ACCGGAGAGC CACTGATGAC CCTGATCGGC
GTGCTCCATC ATGTAGACTC GCTCAAGGCA TACAACAGCG CGCTCGTGGC CATTGCGGCC
GAAGAACACC GGTAG
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| Protein sequence | MARRESSPLS EYLANTKARL RDARRVLVHR GPSQLQFWLI ALVIGVLAGF AALFFRKGIT
ALQGAVYGAE DVDYLHSFAA TLPWYVLLLV PVFGGLIVGI ILHRFTPDGR VRSVADVIEG
AALRDGRVEI REGLASACAS FLTLSTGGSS GREGPVVHIA GMISTWVSDR IRADGITGRD
LLGCAVAAAV SASFNAPIAG ALFAMEVVLR HFSVNTFAPI VVASVAGTVI NRLEYGDVTE
FVLTTPGALQ FYVELPAFLM LGLICGVVAV VLMHSIFLAD RVGTAVQSAL GMPRWLRPTV
AGFLLGLVAI WYPHIIGVGY ETTVLALSGS LLLSQAILFT IVKVAAVSIT MGGRMGGGVF
SPSLMVGALT GLAFGLIATN FLPDVSGTHT LYAFAGMGAV AAAVLGAPIS TTLIVFELTG
DWQIGLAVMV SVSMSTALAS RMVDRSFFLT QLEKRDLHCA AGPQAYLLGT LRVGKVMRPL
ADSDPESAQA LIDEGIAISP TSTLEAALPI FDRAGVEYIP VVTEEEFSEE TGEPLMTLIG
VLHHVDSLKA YNSALVAIAA EEHR
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